Oncorhynchus nerka (sockeye salmon): 115103319
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Entry
115103319 CDS
T07952
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115103319
Enzymes [BR:
one01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
115103319
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
115103319
Prokaryotic type
115103319
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
115103319
NCBI-ProteinID:
XP_029480052
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All DBs
Position
LG20:complement(66181211..66197156)
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AA seq
551 aa
AA seq
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MHRSLLLIPASKHIWKFVTLESQRHCSFTKLVGPSSINNQTTMPAEKRKATFVKMDNTKR
QKLQAVKDGKRERVEGWLQDVVAEQRKEKKDLKFNKQRLRFLSQTQKIKQGSEGVVYWMN
RDHRVQDNWALIYAQQLALEEKLPLHICFCLVVSQNSELATIRHFGFMLRGLEEVAKDCS
ALDIQFHLLHGFAGELLPGFVADWSFGAVVTDFSSLRTPLQWVEEVKKGLPSDIPFIQVD
AHNVVPCWVASDKLEYSARTIRNKITKLLKEFLTEMPLVDKHPHTALRTAKPVDWAEALA
SLEVDRTVEEVDWAKSGTAAGIAMLESFIDLRLKNFATQRNNPNSSAVSQLSPWIRFGHL
SAQRVVLQVKCCGKSAGESVSSFTEELVVRRELTDNFCFYNPSYDSVKGANDWAQKTLKD
HAKDPRPYVYTREQLEKAQTHDKLWNAAQYQMVIEGKMHGFLRMYWAKKILEWTSSPEGA
LSIAIYLNDRYELDGQDPNGFVGCMWSICGVHDQGWAERPIFGKIRYMNYKGCTRKFDVA
QFERKYCPKDL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcagtttgttgctcattccagcatccaagcacatttggaagtttgtgacactc
gagagccaaagacactgctcctttaccaaattagtaggcccaagcagcattaataatcaa
accaccatgccagcagaaaaacgcaaggcaacatttgtgaaaatggacaacaccaaacgg
cagaagctgcaggctgtaaaagatgggaagagggagagagtagagggctggctgcaggat
gtggtggcagagcaacggaaggagaagaaggacttgaaattcaacaagcagcgcctccgt
tttctgtcccaaacccagaagataaagcaaggttcagagggagtagtctactggatgaac
cgggatcacagggtccaagataactgggcgttgatctatgcccagcagcttgccctcgaa
gagaagctgcccctgcatatctgtttctgtttggtggtatcacaaaactcagagttggcc
accatccgccattttggcttcatgctgaggggactggaggaagttgcaaaggactgcagt
gccctggatattcagttccacctgctccatggcttcgctggagaattgctgccagggttt
gtggcggactggagttttggggcagtagtgaccgacttctcctctctaaggacaccgctg
cagtgggtggaggaggtcaaaaaggggcttccgtcagatatccccttcatacaagtcgat
gcccataacgtggtgccctgctgggtggcatcagacaagctggagtattctgccaggacg
atccgtaacaagatcaccaagcttctgaaggagttcctcacagagatgcctttagtggac
aaacacccacacactgctctccgaaccgccaaaccagtagactgggcagaggcattggcc
tctctggaggtggacaggacggtggaggaggtggattgggccaagtctggcactgcagca
ggcatagccatgttggaatctttcatcgacctgcgcctcaagaactttgccactcagagg
aacaaccccaattcttctgccgttagtcagctctcgccgtggatccgtttcggtcacttg
tctgcccagcgcgtggtgctgcaggtaaagtgctgtgggaagagtgccggcgagtccgtt
tcctccttcacagaagaactggtggtgcgcagagagttgaccgataacttctgtttctac
aaccccagctatgacagtgtgaagggtgcaaatgactgggcccagaaaacgttgaaagat
cacgccaaagaccccaggccatacgtctatacccgcgagcagctggagaaagcccagacc
cacgacaagctctggaacgcagcccagtaccagatggtgattgagggtaagatgcatggc
ttcctaaggatgtactgggccaagaagatcctggagtggacctcttcaccagagggagcg
ctctccatcgccatctacctcaacgaccgatacgagttggatgggcaggaccccaacgga
ttcgtaggttgtatgtggtccatatgtggggtccatgaccagggctgggccgagagaccc
atcttcggaaagatacggtacatgaactacaaaggctgcacccgcaagtttgacgtggca
cagtttgagaggaagtactgccccaaagacctgtaa
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