Oncorhynchus nerka (sockeye salmon): 115103392
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Entry
115103392 CDS
T07952
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115103392
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115103392
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
115103392
NCBI-ProteinID:
XP_029480163
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All DBs
Position
LG20:complement(69296492..69428622)
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AA seq
798 aa
AA seq
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MRLNCPPMWSVISVLTVLVPLWEMGCSGLTLNSVPLHQVGMYQRSGDGGAHHRQRRSWVW
NQFFVLEEYMGDEPLYVGKLHSDVDKGEGQVKYVLNGEGATSIFTIDENTGDIHATKRLD
REEQPYYTLRAQARHRHTNLPVEPESEFVIKVQDINDNEPKFLDGPYSARVPEMSPVGTS
VVTVVATDADDPTYGNSARVVYSILEGQPYFSVEPRTGVVRTALPNMDREAREQYLLVIQ
AKDMVGQMGGLSGTTSVTVTLTDVNDNPPHFSRKSYQFSVPESLPVATTVAKIKALDSDV
GPNAEMEYRIVDGDGLGLFRITPDPDTQEGLITLQKGLDFETKSSYTLRVEASNRNIDLR
FLSLGPFSDTATVRLNVQNVDEPPVFSSPFSKMVISEEATVGTTIGTIFAHDPDSTNSPI
RYSIDRNTDLERFFNIDATTGVISTAKPLDREVNAIHNITIFATEILDPLQVGKGVVLIT
VTDINDNAPVFAIEYETYLCESARPGQVIETISAVDRDQPQSGHRFFFSLTAEAAGNLNF
TLRDNKDNTASVLTKRGGFQRRHQNVYRLPVLIMDNGSPALSSTNTLSIRVCDCDPDGIP
QSCGSENSMLSAGLSTGALIAILACILTLLVLVLLIITMQRRRKKEPLILDEERDVRENI
VRYDDEGGGEEDTEAFDMVALRNLNVVRESGSKNRRDVTPEVPTLFSSSRPPPDNGIFRE
FIWDRLKEADVDLSAPPYDSLQTYAFEGSGSAAESLSSLDSLSMDSEQNYDYLSDWGPRF
KKLADLYGHSDGGNLFVS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgaactgtccccccatgtggagtgtgattagcgtgttgactgtgctcgtaccc
ctttgggagatgggctgctctggcctgaccttgaactcagtgcccctgcatcaggtcggg
atgtaccaaaggagcggcgacgggggggcacaccacaggcagaggcgcagctgggtttgg
aaccagttctttgtgctggaggagtacatgggggacgagccactctacgtgggcaagctt
cactcggacgtggacaagggtgaagggcaggtgaagtacgtactcaacggagagggagct
acctccatcttcaccatcgacgagaacacgggtgacatccacgccaccaagcgtctggac
cgcgaggagcagccttactacacgctccgggctcaggccaggcaccgccacaccaacctg
cccgtggagccagagtctgagttcgtcatcaaggtccaggatattaacgacaatgagcca
aagtttctggatggaccctactcagccagggtccccgagatgtccccagtgggcacatct
gtggtgacggtggtggcgactgatgcggacgaccccacatatggaaacagtgccagggtg
gtctacagtatccttgagggccagccctacttctccgtggaaccaagaacaggcgtggtc
aggacggctctgcccaacatggaccgcgaggctagggaacagtatctgctcgtcatccag
gccaaggacatggtgggtcagatgggaggactctccgggaccacctctgtcacggtgacg
ctcactgacgtcaacgacaacccaccacacttctctcgcaagagttatcagttcagcgtg
cccgagtccctgccggtggccacgacggtagccaagataaaggcgctagactcagatgtg
ggacccaatgctgagatggaatacaggatcgtggatggggacggcctgggactgttccga
atcacccccgacccagacacacaggagggcctcatcactctgcaaaagggcctggacttt
gagaccaagtcgagctacaccctgcgtgtcgaggcgtccaatagaaacatcgacctgcga
ttcctttccctggggccgtttagcgacacagcgacagtgcgcctcaacgtgcagaacgtg
gacgagccgcccgtcttctcctcgccgttcagcaagatggtaatctcggaggaggcaacg
gtaggcaccaccatcgggaccatcttcgcacacgacccagactccaccaacagtcccatc
agatactctatagaccgcaacaccgacttggagcgtttcttcaacattgacgccaccacc
ggtgtcatcagcaccgccaagcccctggacagagaagttaacgccatacacaacatcacc
atcttcgccacggagatcctggacccattgcaagtgggaaagggtgtagttctgatcaca
gtgacggacatcaatgacaacgcgcctgtcttcgccatcgagtatgagacctacctttgt
gagagtgccagacctggacaggtcattgagaccatcagtgctgttgaccgagaccagcct
cagagtggacaccgcttcttcttctccctgaccgctgaggctgctgggaatctcaacttc
accctgagagacaacaaagacaatacggcttctgtgctgaccaagcgagggggtttccag
cgccgccaccagaacgtgtaccgcctccccgtcctcatcatggacaatgggagccccgcc
ctgagcagcaccaacactctgtccatccgggtgtgcgactgcgaccctgatgggatcccc
cagtcgtgtgggagtgagaactccatgctctcagcgggcctcagcaccggggccctcatt
gccatcctggcctgcatcctcacactactggtgctcgtcctgttgatcatcaccatgcag
cgacggaggaagaaggagcccttgatcctggacgaggagcgtgacgtgcgcgagaacatt
gtgcgctacgacgacgagggtggcggcgaggaggacaccgaggcctttgacatggtcgct
ctgcgcaatctcaacgtagtccgtgagagcggtagcaagaaccgccgtgacgtcacccca
gaagtgcccaccctcttctcgtcttcccggccaccgccggacaacggcatcttccgcgag
ttcatctgggaccggctgaaggaggccgacgtggacctgtcagcaccgccctacgactca
ctgcagacgtacgccttcgagggcagcggctcagccgcagagtccctcagctcgctggat
tcgctgagcatggactcggagcagaactacgactacctcagcgactgggggccacgcttc
aagaaactggcagacctctatggccacagcgacggcggcaacctcttcgtctcttag
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