KEGG   Oncorhynchus nerka (sockeye salmon): 115103493
Entry
115103493         CDS       T07952                                 
Name
(RefSeq) syntaxin-1B-like
  KO
K08486  syntaxin 1B/2/3
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    115103493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115103493
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115103493
Membrane trafficking [BR:one04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    115103493
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   115103493
  Exosomal proteins of other body fluids (saliva and urine)
   115103493
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 Spectrin_Anc-1 VBS_C3G9 FAN1_TPR Lzipper-MIP1 Lge1 YtxH
Other DBs
NCBI-GeneID: 115103493
NCBI-ProteinID: XP_029480186
LinkDB
Position
LG21:18368792..18431314
AA seq 272 aa
MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKVSHRLSVEQG
NT seq 819 nt   +upstreamnt  +downstreamnt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgatcgggatcacttcatggatgagttcttcgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacggccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgacatc
aagatggactctcagatagacaagcaagccctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgagagccagggagagatgattgacagaattgagtacaacgtggagcactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaaggtaagtcacaggctctccgtagagcagggctaa

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