Oncorhynchus nerka (sockeye salmon): 115103493
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Entry
115103493 CDS
T07952
Name
(RefSeq) syntaxin-1B-like
KO
K08486
syntaxin 1B/2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115103493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115103493
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115103493
Membrane trafficking [BR:
one04131
]
SNARE
Syntaxin (Qa)
Stx-PM
115103493
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115103493
Exosomal proteins of other body fluids (saliva and urine)
115103493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Spectrin_Anc-1
VBS_C3G9
FAN1_TPR
Lzipper-MIP1
Lge1
YtxH
Motif
Other DBs
NCBI-GeneID:
115103493
NCBI-ProteinID:
XP_029480186
LinkDB
All DBs
Position
LG21:18368792..18431314
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AA seq
272 aa
AA seq
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MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKVSHRLSVEQG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgatcgggatcacttcatggatgagttcttcgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacggccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgacatc
aagatggactctcagatagacaagcaagccctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgagagccagggagagatgattgacagaattgagtacaacgtggagcactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaaggtaagtcacaggctctccgtagagcagggctaa
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integrated database retrieval system