Oncorhynchus nerka (sockeye salmon): 115103789
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Entry
115103789 CDS
T07952
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
one03015
mRNA surveillance pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115103789
09122 Translation
03013 Nucleocytoplasmic transport
115103789
03015 mRNA surveillance pathway
115103789
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115103789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115103789
03041 Spliceosome [BR:
one03041
]
115103789
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115103789
TREX complex
115103789
Spliceosome [BR:
one03041
]
Complex C
Other components
EJC/TREX
115103789
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115103789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
115103789
NCBI-ProteinID:
XP_029480580
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All DBs
Position
LG21:complement(5683500..5686349)
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AA seq
272 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAVSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGGNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFVEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGGGGFNRDRIGRPNFSERRGGGDRRGGRGSRGR
GRGGRGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggatatgtctttggatgacattattcaacaaagtaagaaaggtgga
ggtggccgcggaaatcgaggaggccgcagccgaggatcatcgggtcgaggtgggagtgga
gggcgacccggtggcgctgtctctggaggccggacaggcggatccgggcccatgaggagt
cgacagaacttcagcggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagcttccggacaaatggcaacacgacatgttcgaaggtggctttggcggtaatgctggt
ggtggcgggggagcaggcggtggcggtgtagagactggtggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgtggaatttggtacattg
aagaaagcggctgtgcattatgaccggtctggccgcagccagggaaccgccgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgat
ggccgcgccatgagcattcagcacgtcacatcacaaatcagagacgataaccagagacga
ccttcacagagttcaaatggaggcggtggtggattcaacagagaccgaatcggacgcccc
aatttctcagaaaggcggggaggcggagacaggcggggaggcagaggctccaggggcagg
ggtagaggcggacgtggtggtggcaaaccgcagcagttgtctgctgaagagctggatgcc
cagttggatgcttacaatgccaagatggagaccagttag
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