Oncorhynchus nerka (sockeye salmon): 115103812
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Entry
115103812 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
one04137
Mitophagy - animal
one04144
Endocytosis
one04340
Hedgehog signaling pathway
one04350
TGF-beta signaling pathway
one04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115103812
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115103812
04350 TGF-beta signaling pathway
115103812
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115103812
04137 Mitophagy - animal
115103812
09144 Cellular community - eukaryotes
04520 Adherens junction
115103812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115103812
04121 Ubiquitin system [BR:
one04121
]
115103812
03029 Mitochondrial biogenesis [BR:
one03029
]
115103812
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115103812
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115103812
Autophagy
Mitophagy
Other mitophagy associated proteins
115103812
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115103812
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115103812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
115103812
NCBI-ProteinID:
XP_029480632
LinkDB
All DBs
Position
LG21:complement(6809572..6878893)
Genome browser
AA seq
806 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPNGAAIGVLPSS
GSDARVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNS
PGPNSPGPNGPSPNGSRVAMESQSQNTNLSSRQSNQLKEQQPPPQVPALSPAQLPEEAEC
LTVPKYKRDLVQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRL
MVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSY
FHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDIT
GVLDHTFCVEHNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQ
KGFNEVIPQHLLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVES
YDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDV
PAYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacagacaccgtaaggaacacgctggaccccaagtggaaccaacattacgacctg
tacattgggaagtctgactccatcaccatcagcgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcctgggctgtgtacgcctcctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaatgacaca
gtgagaggccagatcgttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgacggctgggaggagcggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagcccctccgggcggcccctcagctgcgtagtg
gatgagaacactccggtcatgacacccaacggggcggccatcggtgtgctgcccagcagt
ggcagtgacgcgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgcccgagggatacgagcagagaaccaca
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgacccc
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgccgggc
tgggagatccgcaacacggcaacggggcgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaacagc
cctggtccaaacagccctggtccaaacggtcctagtccaaacggttcccgtgtggccatg
gagagccagagccagaacactaacctcagtagtcgtcagtcgaatcagttgaaggagcag
cagccccccccgcaggtcccggcgttgtccccggcccagctccccgaggaggccgagtgc
ctcaccgtgcccaagtacaagagggacctggtccagaagctcaagatcctccggcaggag
ctgtccaatcagcagccccaggcaggacactgtcgcatcgaggtctgccgtgaggagatc
tttgaggagtcgtaccgccaggtgatgaagatgcgtcccaaggacctgtggaagagactg
atggtcaagttcagaggagaggagggcctggactacggaggagtggccagggagtggctg
tacctgctgtcccatgagatgttgaacccctactacggcctgttccagtactccagagac
gacatctacaccctgcagatcaacccagacagcgccgtcaacccggagcacctgtcctac
ttccactttgtgggtcgtatcatgggcatggcggtgttccacggccactacatagacggg
ggcttcaccctgcccttctacaaacagctgctggggaaacccatcaccctggacgacatg
gagtcagtggacccagacctccacaacagcctggtctggatcctggacaacgacatcacg
ggggtgctggaccatacgttctgtgtggagcacaatgcctacggagagatcatccagcac
gaactgaagcccaacggcaagactgtctctgtctccgaggacaccaagaaggagtatgtc
aggctgtatgtgaactggcgtttcctccacggcatcgaggctcagttcctggccctgcag
aagggcttcaacgaggtcatcccccagcacctgctcaagtcctttgacgagaaggaacta
gagttgatagtgtgtggcctggggaagatcgacatagcggattggaagagcaacacacgt
ctgaagcactgcaccacggacagcaacgtggtcaagtggttctggaaggccgtggagtcc
tacgacgaggagaggagggccagactgctgcagtttgttaccgggtcatctagagtccca
ctgcagggattcaaggctttacaaggtgccgcggggcccaggctcttcaccatccaccag
atcgatgccaacaccaacaatctacccaaagcccacacctgctttaaccggattgacgtt
cccgcctacgagcactatgacaagctgtacgacaagctgctgacagccatcgaggagacg
tgtggctttgcggtggaatga
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