Oncorhynchus nerka (sockeye salmon): 115103851
Help
Entry
115103851 CDS
T07952
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115103851
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115103851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Sporozoite_P67
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115103851
NCBI-ProteinID:
XP_029480705
LinkDB
All DBs
Position
LG21:8548086..8554626
Genome browser
AA seq
363 aa
AA seq
DB search
MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPDRNGFEEFPLTGFYSISAHPRKQRRERT
TFTRTQLDILESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNA
KVRPAKKKSSPTRESTGSESSGQFTPPAVTSTGSSSSSSASSGGSHPSGHGGQGLSSTST
SVTAPVSSIWSPAPISPAPAPPPVPDPAPPTSASCMQRSVSGTGGTSSYPVSYSQTAASY
GQGYPAPASTGSYFGGVECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGH
HHHHHPHHHQAYSGAGLAFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRF
QVL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatgggcctcagcggtacg
gccatggacctactgcacccatcagtggggtatccagatcgaaatggcttcgaagagttt
ccattgacaggtttctattccatttcagcgcatccgaggaaacagcggagagagaggaca
acttttactcgcactcagctggacattctggagtcccttttcggcaagacgcgctaccca
gacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtctagagtccaa
gtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtggaaacaatgct
aaagtccggcctgccaagaagaagtcctctccaaccagggagagcacaggctcagagagc
agtggtcagttcacccctccggcagtgaccagcaccggctcctcttcctcttcctctgcc
tcgtccggtggctctcatccctccggccatggaggccaaggcctgagcagcacttctacc
tccgtgactgccccagtgtcctccatctggagccctgcgcccatctccccggcccccgca
ccaccccctgtccccgaccccgctcccccaaccagtgcctcctgcatgcagaggtctgtg
tcaggtactggaggcacgtcctcctacccggtgtcctacagccagacagcggcgtcctat
gggcagggctaccccgccccggcgtcaacgggctcctacttcggaggggtggaatgcagc
tcgtacctggcccccatgcactctcaccaccacccccaccatccgcaccagctcagcccc
atgacgggctcctccatgtctggccacccgcaccaccatatagggcagacctcagggcac
caccaccatcaccacccccaccaccaccaggcctacagcggggccggcctggccttcaac
tcctcagactgtctggattacaaagaacaaacggccgcggccgcagcctcttcatggaag
ctcaacttcaacaccaccgactgcttggactacaaagaccaggcctcctcttggcggttc
caagtcttgtga
DBGET
integrated database retrieval system
