Oncorhynchus nerka (sockeye salmon): 115103865
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Entry
115103865 CDS
T07952
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115103865
NCBI-ProteinID:
XP_029480736
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Position
LG3:complement(9410055..9589804)
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AA seq
1106 aa
AA seq
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MRLVPGSPRPLPLLAVGLALALTALLPHLAMGVTPFPQDLEPISIVGREHSYLYPSFHGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAISLSASSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFPRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESTWTPVPEEQVPKPRPGCCAGDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTHLNASFSTQLLED
IDVYNPTKCNIRGEDRRVLGLELDREHHALFVAFSSCVIRVPLSRCNDYGSCKESCLSSR
DPYCVWQRTGSCATVVPGFRGGFEQDVENGYPHYPDSCHDVLATTRKQNTLADSAYGKTT
PTTTASTTNQVAPFPKVAGDSERGTGPDGGPPVPVGDQGSPDSEPISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGNKTKRLAKDPEAPIPHALSLRS
LAKLNGLLDSQNKEDKMEVSSPKLYNSFFQNGKEHRQGAPRRNGGHHPGMTMGDLVHPHQ
LHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNMGQGSRPSSGLLH
QQIYPYSHSFSNGQALANGHALVGGPQHLEERKIHNTERMLVQQPYPCYPQKVMEVTSLD
ELLKHIHEANSSKNTQVMTSSGLSASGGCHGSQLAFANRIQPHIPETESAPYYSSSTLPR
DSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQHQPPPMLARMNSTGSACEIHYPLIPNGYLTRQQSYNGEQQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggcggtgggcctggctcta
gccctcacagcccttttacctcacctggccatgggagtcacacccttcccccaggacctg
gagccaatcagcattgtggggagagaacactcctacctgtacccaagcttccatggcctc
atgtcggacaacgatacagtacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacatcgcagccagggatcatgtgtttgctatcagtctcagcgcctcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaagatgtggataaatgcaca
gtgagagggaagaacagcgatgaatgctacaactacatcaaagttctggttccacgcaac
gatgagacgctatttgcctgcgggaccaacgcttttaaccccacctgccgcaactacaag
atgtccacactggaacaggacggtgaggaggtggtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctcttcgctggtggtgatttctactcggccaccatgaca
gacttcctggcgagtgatgcagtaatttaccgtagtctgggagagagcagcccggtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctcatttcctccatgccattgag
tacgggaactacgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttccccagagtggctcgtgtatgtaagaacgacaacggaggttctcccagg
gttctagagcgttactggacgtcgttcctcaaagcgcggctcaactgctcggtgccgggc
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctgcagatcaatcac
agaccagccgtgctgggggtcttcactacacaggccaacagtatcacaggctcagcagta
tgtgcattctacatggatgacattgagaaggccttcaatgggaagttcaaggagcagagg
aacagtgagtcaacctggacgcccgtgcctgaggagcaggtacccaaacccagaccaggc
tgctgtgccggcgacggctctgccgctgcctacaagtcgtccacgaccttccccgacgac
accctgaccttcatcaagaaccatcccctgatggacgaggcggttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatacg
tcagctgggccctataagaaccacacggtgctgttcctggggagcgaggacggcagggta
ctgaagatcctggccagcacccatctcaacgcctccttcagcacacagctactggaggac
atcgatgtctacaaccccaccaaatgtaacatccgcggagaggacagacgggttctggga
ttggagctggacagggaacatcacgccctgtttgtggccttctccagctgtgtgatccga
gtacctctgagccgctgcaacgactatggctcctgcaaggagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggacggggagctgtgctacggtggtgcccggattcagg
ggcggatttgagcaggatgtggagaacggctaccctcactacccagatagctgccacgac
gtcctggcgaccacacgcaagcaaaacactcttgctgattcagcatatgggaagactaca
cccacaacaaccgccagcacaaccaatcaggtggccccattcccaaaggtggcaggtgac
tctgaaagaggtacaggtccagatggcggtcctccagtcccagttggggaccaggggtca
cctgactcggaaccaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgatcgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggttttctggtctcctgctactgcaaccacaccggcaacaag
accaagaggctggccaaggacccggaggcccccatccctcacgccctgtccctacgcagc
ctggccaagctcaatggcctgctggacagccagaacaaggaggataaaatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcgtcaaggagcaccc
agacggaatggtggtcaccacccagggatgaccatgggagacctggttcacccccatcaa
ctacaccactcttcggagctctctggtcttcccaccccagactccacccctgaactgccc
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaggagcccaagtcccacaacatgggacaaggttccaggcccagctcaggcctgctccac
cagcagatctacccctactctcacagcttctccaatgggcaagctctggccaatgggcat
gccttggtcggtggaccccagcacctggaggagcgcaagatccacaatactgagcgcatg
ttggtccagcagccttacccctgctacccgcagaaggtgatggaggtcacatcgctggac
gagctgctcaaacacatccacgaggccaactccagcaagaacacccaggtcatgacttca
tccggcctgtcagccagcggcgggtgccatgggagtcaactagcttttgccaaccgcatc
cagccgcacatcccagagaccgagtcggcgccttactacagctcgtccaccctgccccga
gacagcctgacccgccgcatggacgtacctccggacatgccccctcaccaccagtccacc
ctggagcggaggcactcttcccagagacactcactgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggttcaccgacagcaaagcttcagccagcgtaacggc
caccagcaccaaccaccccctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaatgggtacctgacacgccagcagagctacaatggagag
caacaggaggataccggaggatacctccaccgaggagccatagtccgccggaccacctcc
ctcaaacccgacgtccctcccaaacccctcttcatccctgcctcctctcccgtcaaccaa
cagggaaacttcaactactga
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