Oncorhynchus nerka (sockeye salmon): 115103888
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Entry
115103888 CDS
T07952
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03008
Ribosome biogenesis in eukaryotes
one03013
Nucleocytoplasmic transport
one03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115103888
03008 Ribosome biogenesis in eukaryotes
115103888
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115103888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115103888
03009 Ribosome biogenesis [BR:
one03009
]
115103888
03016 Transfer RNA biogenesis [BR:
one03016
]
115103888
03036 Chromosome and associated proteins [BR:
one03036
]
115103888
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115103888
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
115103888
Pre-60S particles
115103888
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115103888
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115103888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
115103888
NCBI-ProteinID:
XP_029480774
LinkDB
All DBs
Position
LG21:9939735..9955325
Genome browser
AA seq
1070 aa
AA seq
DB search
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKDGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMDQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLVEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRTLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
SLNPASQNNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaacatgacaatgttggcggatcatgcagcaagacagctgctagacttcagt
caaaagctggacatcaatttgctggacaatgtagtcaattccatgtactatgacattgga
tcacagcaacgcatggcccaggaggtgctgaccaacctcaaggatcacccggacgcatgg
acacgagtcgacaccatcctggagttttctcagaacatgaagactaaatactatgcactg
caaattctggagactgtgatcaagacacgctggaagattcttccaagaaatcaatgtgaa
ggaataaagaagtatgtcgttggtctgattatcaagacctcatctgatgccgcaaatgtt
gagaaagatggagtgtacattgcaaaacttaacatgatcctcgtacagatcctgaagcag
gagtggcccaagcactggcctaccttcatcagtgacatcgtgggtgccagccgcaccagt
gagagtctgtgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtctttgac
ttctccagtggacagatgacccaggtgaaggccaagcacctgaaagacagtatgtgcaac
gaattctcgcaaatattccagctctgccagtttgtcatggaaaactcccagaatgcccct
ctggtccaagccacactcgagactctcctgcgtttcctgaactggatccccctggggtac
atatttgagaccaaattgatcagcactctggtgtacaagttcttgaacgtgcccatgttc
cgcaacgtgacgctgaagtgtctgacggagatcgccggcgtgagtgtcaaccagtatgag
gagcagtttgtcaacctcttcacgctcaccatggatcagctcaaacagatgctccccctg
aacaccaacatccgcctggcatattccaacggcaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaagagcatggacagctcatcgagaagagg
cccaaccttagggagacactcgtggaggctctgcactacatgctgctggtgtctgaggtg
gaggagacggagatctttaagatctgtctggagtactggaatcacctggcggccgagctc
tacagggagagccccttctccacctccacctcccccctgctttctgggagccagcacttt
gacgtgccgccacgccggcacctctacctgcccgtgctctccaaggtgcgtacgctcatg
gtgagccgaatggccaaaccagaggaagtgctggtggtggagaacgaccagggcgaggtg
gtccgagagttcatgaaggacacagactcaatcaacctctataagaacatgagagagaca
ctggtttacctgacccatttggactatgcggacacggagcgcatcatgacggagaagctg
cacaaccaggtcaacgggacagagtggtcgtggaggaacctgaacacgctatgctgggct
atcggctccatcagcggggccatgcacgaggaggacgagaagcgcttcctggtcaccgtc
atcaaggacctgctgggtctctgtgagcagaagagggggaaggacaacaaggccatcatc
gcctcaaacatcatgtacatcgtgggccagtacccacgcttcctccgagcccactggaag
ttcctcaagactgttgttaacaagctctttgagttcatgcacgagactcacgatggtgtg
caggacatggcgtgcgacaccttcattaagatcgcccagaagtgccggcgccactttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctccagccccaacaggtgcacacgttctacgaggcggtgggctacatg
atcggggcccagacggaccaggccgtgcaagagcacctcatcgagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccaacaggccaccaagaatgtggacatcctgaag
gatgcagagacagtgcgtcagctgggcagcatcctgaagaccaacgtgcgggcctgcaag
gccgtgggacatcccttcgtggtgcagctgggacgcatctacctggacatgctcaatgtc
tacaagtgtctgagtgagaacatctcctctgccatccagaccaacggagagatggtgacc
aagcagcccctgatccggagcatgaggacggtgaagagagaaacgctcaagctgatctca
ggttgggtcagccgctccaacgacccacaaatggtgggggagaactttgtcccgcccctg
ctggaggccgtactcatcgactaccagcgcaacgtccccgccgccagagagcctgaggtg
ctcagcaccatggcgaccatcgtcaataaactgggtggacacattaccggggagatcccg
aagatcttcgacgcagtcttcgagtgcactttgaacatgatcaataaagactttgaggag
tacccagagcataggacccatttcttctacctcctccaagctgtgaactcgcagtgcttc
ccggccttcctttccattcccccggcccagttcaaactggttctggactccattatctgg
gctttcaaacacaccatgaggaatgttgcagacactggtctgcagattctttacaccctg
ctgcagaacgtggcccaggaggaggctgctgcacagagcttctaccagacctatttctgt
gacatcctccagcacatcttctctgtcgtcacagatacctcgcatacagcagggctaacc
atgcacgcatccatcctggcctacatgttcaacctggtggaggagggtaaaatcagcacc
tccctcaacccagccagccagaacaaccagggctacgttcaggagtatgtggccaacctg
ctcaagacagccttcccccatctacaagatgcccaggtgaaggtgtttgtaacaggtcta
ttcagcttgaaccaggatatccccgctttcaaggagcacctgagggacttcctggtgcag
atcaaggagtttgctggcgaggacaccacagacctgttcctggaggagcgggagacgtcg
ctgcggcaggcccaggaagagaaacacaagctgcagatgtcagtccccggcatcctcaac
ccccatgagctccccgaggagatgtgcgactga
DBGET
integrated database retrieval system