Oncorhynchus nerka (sockeye salmon): 115103979
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Entry
115103979 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115103979
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115103979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115103979
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115103979
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
115103979
NCBI-ProteinID:
XP_029480933
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All DBs
Position
LG21:13913636..13922502
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AA seq
296 aa
AA seq
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MGCLERTAFQCNFHICAVTFDTELRGVGNQRPLGTESVSCSSGGTSFYFSFADTKVYVGN
LGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGKLISGSRV
RVELSTGMPRRSRYERAPTNRPFDSNDKCYECGERGHYAYDCHRYSRRRRSRSRSLSRSG
GRRYSRSRSRDRGRRSRSFSLRRSRSPRRSRALTPKRSRSRSKSRSRSRSLSRAKTRSGS
PTRRYAEVLSLTPIFFHPFSSLNELWNSLTMHDKQQNETMKMLSIQFKRCRCMMVH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggatgccttgagaggaccgcatttcaatgcaatttccatatttgtgcagttactttt
gatactgagcttaggggagtgggaaatcaaaggcctctcggaacagaatcggtgagttgc
agcagtggtggcacctctttctatttttcctttgcagacactaaggtttacgtcggtaac
ctgggcactggtgcagggaaaggagagctagagcgggcgtttgggtattacggacccttg
agaacagtgtggattgctaggaaccccccagggtttgcctttgtggagtttgaagacacc
cgtgatgcagaagatgcggtccgtggccttgacggcaagttaatttctggatctcgagtt
cgagttgaattatctacagggatgccgcggcgatctcggtacgagcgtgcgcccaccaac
cggccctttgactccaacgacaagtgctatgagtgtggtgagcgggggcactatgcctac
gactgccaccgctacagtcgacgcaggaggagcaggtcccggtctctctccaggtccggt
gggaggaggtactctcgctctcgcagccgggaccgtggcaggagatcaagatccttctcg
ctacgccgctctcgttctcctagaagatcgagagcccttacccccaagagatcaagatct
cggtcaaagtccagatcaaggtctaggtcactttcccgtgcaaagaccaggtctggttcc
cccacgaggaggtatgcagaagtattgagtctgaccccaattttcttccatccattctcc
tctctaaacgagctatggaacagtttgacaatgcatgataagcagcaaaacgagacaatg
aaaatgttgtcgatacagtttaaacggtgtagatgcatgatggttcattaa
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