KEGG   Oncorhynchus nerka (sockeye salmon): 115103990
Entry
115103990         CDS       T07952                                 
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain-containing protein 4-like
  KO
K11722  bromodomain-containing protein 4
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:one01001]
    115103990
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115103990
   03036 Chromosome and associated proteins [BR:one03036]
    115103990
Protein kinases [BR:one01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   115103990
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     115103990
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    115103990
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 115103990
NCBI-ProteinID: XP_029480959
LinkDB
Position
LG21:complement(14488751..14540039)
AA seq 1540 aa
MGDGLDATTVQMSSSGSGSSSQGGQPQPSTYVPTVPEFNPPPPEYVNSSQPKRQTNQLQY
LLKVVLKTLWKHHFSWPFQAPVDAVKLNLPDYYKIIKVPMDMGTIKKRLENSYYWNAQEC
IQDFNTMFTNCYIYNKPGDDIVLMAEQLEKMFLQKITEMPQDETEIAVMTGKGRGRGRRE
GGLNLKPGPTMDSPSTTPQTRGFSSHSPGPQTRGPPVQQQTQDQGPPSLPPQPLMQALPS
RVPTTLPVHAHAPQLGAPYSLGPSDLPLQAPPKLPIMTSVPPPPTQTTLPPTSIQSTAPI
LQNPVPMAKQRKSQKRKADTTTPTANDQLSESSPAESKSGKTLPRRESARPTKLIKKEAP
DSQHHLGLGIGLGLGGPGGPGVGAHSPKQQEQLRYCSSLVRDMLHKKHAAYAWPFYKPVN
VDMLGLHDYHDIIKHPMDLATVKLKLDNRQYRDAQEFAADVRLMFSNCYKYNPPDHEVVA
MARRLQDVFEMRFAKMPDEPDEMLASAPTPVLLQSSAPIIKAQPPPILNPASSILGPASS
VKHPASSSDSSSDSSSESESSTNDLEEERAQRLAELQEQLKAVHEQLAALSQPQASKPKR
KEKEKKKDKHKRKGAVEEIPEPAIQFPKKTKNNNSNSSNNKELLPKKTKKLSKKEGGAVK
NNHSAALGPQAALQPPALQPVSGLGEGLEDTPAAAGAPGEKGRPMSYEEKRQLSLDINKL
PGDKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVSSCLRKNKKKVPVA
EKTMEAMTAAKIKASSSSDSDSSDSSSSDSDEEKGIPPKQKQKKGHGTNEGKKPHLHHTM
SGAGPLPQGHPHPQHPHPQGHPHPQGPVLQPSIHLKQQQHHNPSPATYMAPPPVTVTALE
SSQLLENTFDLLPHFGQQPLMHLSQHHHSSSPALPPHLNVHSAAGPVSPETHPFLNQHPI
HPNPPNPNPALHNALPQQPSRPSHRAAALPPKPPQQQQPATQPTLLLQQQLQPQAPPXQH
HLQPHILHPAPPQSLQQRPLSPPTLTPQGLMSSLPPQMLLEDDEEVIPPLPLSQVHLYLQ
QLQQGQSQGRPGQQPHNPQQIMQSLQIRQQQQNQAPLLQSVQVQPSQPSLQPPQLSVQLP
QPQSKPPSRQPQQILPPHQVARHLQQHAQMGYPSQGPGAQQTGQSDRHAAAGQHKGSMQS
SAKAQHIIQQHLSPRQIKADPYNSGHLRENPSPIMMHSPHLPQYPPITHQSPPHNLQPKK
EQRAPPALVGLKEEKLPPSPVMRGGEPFSPAMRQDPHKHLDCHSKPSLPVHTQQNVKSMD
SSRPVIRSSEPSGPPSSSSLPDKDKFKQEPKTPVAPKKVQDVKLKNMGSWASLAQKPTSA
PLSAVKSSSDSFEQFRRAAREKEEREKALKAQAEQAERDKLRREQEKLRGRDRDDEDILE
PQQQSRRVHEEPRSRRLEQQQHIQAPQPQQQPQAPAPQAQPAALPQPPQAPTPPQPSAQD
QQRELARRREQERRRREAMAATIDMNFQSDLMAIFEENLF
NT seq 4623 nt   +upstreamnt  +downstreamnt
atgggggacggcctggatgcaaccacagtgcagatgtcttcgtcgggcagcggtagtagc
agccagggggggcagccccagccatccacctacgttccaaccgtgccagagtttaacccg
ccgcccccggagtacgtcaactcatcgcagcccaagcggcagaccaaccagttgcagtac
ctgctgaaggtggtgctgaagaccctgtggaagcaccacttctcctggcccttccaggca
cctgtcgacgccgtcaaactcaacctaccggactactacaagattattaaagttcctatg
gatatgggaacaatcaagaagcgacttgagaacagctactactggaacgcccaagaatgt
attcaagatttcaacaccatgttcaccaactgctacatttacaacaagcctggagatgac
atagtgttaatggctgagcagctggagaagatgtttctccagaagattactgagatgccc
caggatgagacggagattgctgtcatgaccggcaagggacgaggccggggccgacgggaa
ggaggtctgaacttgaagccaggcccaactatggattctccgtccaccaccccccagaca
cggggcttctccagccactccccaggcccccagaccagaggaccaccagtgcagcaacag
acccaggaccaggggccaccatctctacctcctcagcccctcatgcaggccctgccctcc
cgcgtgcccacaacgctacctgtccatgcccatgcgccacagctgggggccccctactca
ctgggcccgtcggacctgcctctccaggcccctcctaagctcccgattatgacctccgtg
cctcctccacccacccagaccactctgccccccacctccatccagagcactgccccaata
ctgcagaaccccgtgcccatggccaaacagagaaagagccagaagaggaaagctgacacg
accacccccacagccaacgaccagctaagtgagtcttctccagccgagtccaagtcgggg
aagacgctgccgcgacgtgaaagcgccaggcccaccaagctaatcaagaaggaggctcca
gactcccagcaccacctgggccttgggataggtctcggtctagggggacccggaggacca
ggggtaggggctcatagccccaagcagcaggagcagctacggtactgctccagcttggtc
cgagacatgttacataagaagcacgcggcctacgcctggcccttctacaagccagtaaac
gtggacatgctggggctgcacgactaccacgacatcatcaaacaccccatggacctcgcc
accgtcaagttgaagctggacaacaggcagtacagagacgcccaggagtttgctgccgac
gtgcggttaatgttctctaactgctacaagtacaacccacccgaccacgaggtggtggct
atggcacgcagactacaggacgtgtttgagatgcgcttcgccaagatgccagatgagccc
gatgagatgttggcttcggctcctacccccgtgctgctccagtcctccgcccccatcatc
aaggcccagccgccgcccatcctaaaccctgcctcttccatcctaggtcctgcctcctcg
gtcaaacaccccgcttcctcctcggacagctccagtgattcgtcttctgagtcggaatcc
tccacaaacgacttggaggaggagagagcccagagactggccgagctacaagaacagctc
aaagctgtccatgagcagctggcggccctctcgcagccacaggccagcaaaccaaagaga
aaagagaaggagaagaagaaagacaagcacaaaaggaaaggagcggtggaggagatcccg
gagccggccattcagttccccaagaagaccaagaacaacaacagcaacagcagcaataac
aaggagctcctgcccaagaagaccaagaaactcagtaagaaggagggcggtgcggtgaag
aacaaccactctgcagccctgggccctcaggcagcgctgcagcccccagctctgcagccc
gtgtcgggtttgggggagggcctggaggacaccccggctgcagctggagcccccggggag
aagggtaggcccatgtcgtatgaagagaagaggcagctgagtctggacatcaacaagctg
cccggcgacaagctgggtcgtgtggtccacatcatccagtccagagagccctcgctgaaa
aactccaaccccgacgagatcgagatagactttgagacgctcaagccatccacgctgaga
gagctggagagatacgtgtcgtcgtgcctccgcaagaacaagaagaaggttcctgtggca
gagaagaccatggaggccatgactgccgccaagatcaaggccagctcctcctctgactcc
gacagcagcgactccagctcctcagacagtgatgaggagaagggaatccctcctaaacag
aaacagaagaaaggccacgggaccaacgaagggaagaagccccatctccaccataccatg
tctggagctgggcccctcccccagggccaccctcacccccagcaccctcacccccaggga
caccctcacccccagggtcctgtcctgcagcccagcatccacctgaagcaacaacagcac
cataacccctcccccgccacctacatggcccctcccccggtaacggtcacggcgttggag
tcctcccagttgctggagaacacgtttgatttgctgccccacttcggccagcagccactc
atgcacctgtcccagcaccaccactcctcgtcgcctgccttgcccccccacctcaacgtt
cactcggcagcgggtcctgtgtccccggagacgcacccctttctcaaccagcaccccatc
caccccaaccctcccaaccctaacccagctttgcacaacgccttgccccagcagccatct
cgacccagccacagggcagcagctctacctcccaaacccccgcagcagcagcaaccagcg
acccagccaaccctactactacaacaacagctccagccacaagcccctccancccagcac
cacctccagccccacatcctccaccccgcccccccccagtccctgcagcagcggcccctt
tccccccccaccctcacccctcagggcctaatgtcctccctgcccccccagatgctcctg
gaggacgatgaggaggtgattccgcccttacccctcagccaggtgcatctctacctgcaa
cagctccagcagggacagagccagggaagacctggccaacaaccacacaatccccagcag
atcatgcagtctctccagattcgccaacaacaacagaaccaggctcccctcctgcagtct
gtacaggtccagccctcccaaccctctcttcagccaccccagctctcagtccagcttccc
cagccccagtccaaacccccctcgcgccagccccagcagatcctacccccgcaccaggta
gcccgccacctgcagcagcatgcacagatgggttacccctcccaggggccgggggcgcag
cagacgggtcagtcagacaggcacgctgctgcagggcaacacaagggttccatgcagtcc
tccgccaaagcacagcatatcatccagcaacacctctcccctcgacagatcaaggctgat
ccatacaacagcgggcacctaagggagaacccctcccccatcatgatgcattccccccac
ctcccccagtatccccccataacgcaccagtctccgccacacaacctgcagcccaagaaa
gagcagcgtgcgcccccggccctggtaggcttgaaagaagagaagttgcctccctctcca
gtgatgagaggaggagagcctttcagcccagccatgagacaagaccctcacaaacaccta
gattgccacagcaagccctctctaccagttcacacacagcagaatgtaaagtcgatggac
agctctcggccggtcatccgttcctcagagcccagcggtcctccctcctcctcctccctg
ccagacaaggacaagttcaaacaggagcccaaaacgcccgtcgcgcccaaaaaggtacag
gatgtgaaactgaagaacatgggttcgtgggccagcctggcccagaagcccacgtcagca
cccttgtctgcagtgaagtcgtctagtgacagcttcgagcagttccgccgggccgcccgg
gagaaagaggagagagaaaaggctcttaaggcccaggcagagcaggccgagagggacaaa
ctgcgccgggagcaggagaaactacgtggtcgtgacagggatgatgaggatatcctggag
cctcagcagcagtcgaggagggttcatgaggagcctcgaagcagacgtctggagcagcag
caacacatccaggccccccaaccccagcagcaaccccaggcaccagccccccaggcccag
cccgctgccctcccccagcccccacaggcccccacgccgccccagccctcagcccaggac
cagcagagggagctagcgcgacgccgcgaacaggagaggaggaggagagaagcgatggct
gcaaccattgacatgaatttccaaagcgacctgatggctatctttgaggagaacttgttc
tga

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