Oncorhynchus nerka (sockeye salmon): 115103999
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Entry
115103999 CDS
T07952
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115103999
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115103999
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115103999
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
115103999
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
O-linked Gal type
115103999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
DUF6492
Motif
Other DBs
NCBI-GeneID:
115103999
NCBI-ProteinID:
XP_029480977
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All DBs
Position
LG21:complement(14778318..14815651)
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AA seq
609 aa
AA seq
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MHRYIFLLSTALTLLFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGTI
ERLNYPKDRVAVWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSAREMWADYFMVVDCDNLLTNPNVLWKLIKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSAHMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPVKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
IDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWQEISERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEHFEERDLKAFSAEPL
LVFPTHYTGDSGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtacatcttccttctgtccaccgccctgacgttactgttctccggaccagct
caaggatacttccccgaagaacgctggagccccgaatcaccacttcttgcccctcgggtc
ctcattgcccttgtctgccgcaactctgaacattctctgccttatttccttggaactatc
gaacgtctgaattatcccaaggaccgcgtggcagtttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaaacag
tggaccaacctccgctacgcacacgtgatgaagctgcggcaggcagcactggactccgca
agagaaatgtgggcagactacttcatggtggtggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaacaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
cctgcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagttggccttccacccc
cctcacccagactacagctgggccttcgatgatatcattgtctttgccttctccgctcac
atggcagatgtgcagatgttcctatgtaacagagagacgtatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagacagcttcctgcattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccttcggagtacatcccggcccccgtaaagata
caagataagctgggctttgatgaggtgttcatgatcaacttaaagaaacggaccgaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
atagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgacccataccacggtaggcccctcaccaagggagagctgggctgcttcctc
tcacactacaacatctggcaagagatctcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcagaaagaggatgcaggtg
gaccgccctgagaagtccgtacccaatatacacaacctggtggaggccgactactcctat
tggacgctgggttatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtggatgagttcctccctgtcatgttcaataaacaccctgtc
tcggactacatggagcactttgaggagcgggacctgaaggccttctcggccgagcccctg
ctagtgttccccactcactacacaggagactcgggctacatcagcgacacagagacctct
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcactgccacacgggatgaactatga
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