KEGG   Oncorhynchus nerka (sockeye salmon): 115104072
Entry
115104072         CDS       T07952                                 
Symbol
nes
Name
(RefSeq) nestin
  KO
K07609  nestin
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115104072 (nes)
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type VI
     115104072 (nes)
SSDB
Motif
Pfam: Filament COX6B
Other DBs
NCBI-GeneID: 115104072
NCBI-ProteinID: XP_029481113
LinkDB
Position
LG3:complement(10221825..10231737)
AA seq 1769 aa
MELHSLRHHHSHRTDNKLQMLNLNQRLETYLGRVRLLEEENKLLCQELQALRVSGQGGRM
GLEDKLSLARQEVEEAWREKDRVELELGSLGEELQVLGLQRRSEADAHGEVKKKLADSRK
EMEEEKRAQIWLREKVSQLEKQIQFQIQTHQEDIAGFQATLIQVRPALPSPPPQTGTQLP
SLQDLGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRLAQVGQEKIESQLKLQALE
NELYSAQDRRQCLERSVAKQRDMQRQETQNLQAHLKVLEMEKGALGNQIDTLLTESRGLM
QLKMSLGMEVATYRALLDHESLMGDFSSTDQLRSTYTSDGVPSSRGVKQSFQTQLATSHM
ISPFSTIHRASPQSNVTTMSASPIWTQNQVTLNETPESCRKTEKEHVDFDVGSNRQVIWS
TPYPKVPQDGISVDHFRPQDVHEEVNYAEPLSPPTEEAGADVVSWLGSDHKEQSMWDLEK
EEEDQNIVRTWVAKDKPVLEPAMSHQVEISFSMPTVFSTDAQELYSPSVSDERAGSVTGA
HYAFSANDDNDVPFEMSSEKEEPLLDLPYGPMNALEERDLETARKDAEWVGKEGLESETK
SVLEPAFETFTSSQAFEYNKPKEFNQEDNMSYASTQASHGSEEAFHHVKSVEEDVINLTK
EDDENYMSKKDEEQLEDELRPYGYGKDDCERLAGFYNENCVTERIDKFNREAIISYESAQ
ASHWSEEVFHHVERLEEGDIHFTKGDDENDMYNKREEQYALHPNGDVNDEWDRVGGCNEE
NGIREGMDEGKDQEGKDHMKEEEMWNNRETQPNQSDQEHIPSNVEKLNQFEQEHIPLGRE
KLNISDNDKEDHDEANYCQNTSVSWRVELEGDSYTQDNTLADTHPLIRYKSDETDVNTQA
SHMGESDSSDGEQDREVCQTGSGTWGEGKSKQFDTMEDLYEESEGDVIDQERNMGSTHQE
DVDASQTKEHATQENDEENAVDQLIQEAEEEQSYEELTEPGEYSMMCSDEDNNEERIDRL
VEQELENLSISSYSEHFNGQMIESGSVLSLQIVSLTELSQTQDILYSEEVEQIHSERLNQ
SEQEHTTSGGEKLNQSEQEHMTSGGEELNQSEQDHMTSGGEKLNQSEQEHTISGGEKLNQ
SEQEHTTSGGEKLNQSEQEHTTSGGEKLNQSEQEHTTSGGEKLNQSEQEHTTSGGEKLNQ
SVQEYINSGREKLNQSEQEYIPSNGEKMYQSEQDHIPSDEEKLNQSEQENIPFSGEKLNE
SEQEYLPSDGEKMNQSEPGYITSGREKPNLYAQEHIPSGREKLNQSEHEHIPSNGKKLNQ
SEQEYIPSGGEKLNLYEQEPIPSDGEKMNQSEPEYITSGREKPNLYAQKHIPSDREKLNL
TEQDNIPLGGEKLNQSEPGCITSGGENLNTSEQEYIPSGREELNQSEPEYIPSGGEKRNQ
SEPEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSGREELNQSEPEYIPSGGEELNQ
PEPEYIPSEVMYSMTSRIRMTPEHTSLRESSAEISKAEYLAQSNVFSEELGTEAIPDKIE
GQDDQNLSILTHEDFTESHSIHSSLNSRPESQTNMNNSDIEESNSTDDESPNASQYLQRA
NEANLTADQVDLLDVAVSHYEDCNALIEHSAEEVTSYQASHECLQTDKWEVLESQNKHLE
SGDPFAGHKRDSERSSKTDSKGRDLHSFLSSGVHSNFWGSNLETGASYQPDEPYDHVTKL
PNQNLALADNLSWVDLESTGGQLEHEDGQ
NT seq 5310 nt   +upstreamnt  +downstreamnt
atggagctccacagcctccgacaccaccacagccaccggaccgacaacaagctccagatg
ctgaacctcaaccagcgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagctccaggccctgagggtcagtggccagggggggcggatg
ggcctggaagacaagctgagcctggccaggcaggaggtggaggaagcctggagggagaag
gaccgggtggagctggagctagggagtctgggtgaggagctccaagtcctggggctgcag
agacggtcggaggcggacgcccatggggaggtgaagaagaagctggcagacagcaggaag
gagatggaggaggagaagagggctcagatctggttaagagagaaggtgagccagctggag
aaacaaatccagttccagatacaaacccaccaggaagatattgctggcttccaggctaca
ctaatccaagtcagacctgccctgccatcccctccaccccaaacgggcacccagcttccc
agcctccaggacctgggtgaggagtactcccagatggctgtcagggcgtggcatgaggcg
gccatggtgtttcagggccaggtggacagcctggacgagtctctaaaccaggccagaacc
cggttggcccaggtgggccaggagaaaattgagagccagctgaaacttcaggccctggag
aatgagctgtattcagcccaggatagaaggcagtgtctggagaggagtgtggccaaacag
agagacatgcagaggcaagagacacaaaacctgcaggcccatctgaaggtgttggagatg
gagaagggggcgctgggaaatcagattgacactcttctgacagaaagtaggggtctgatg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggaccatgaa
agtctgatgggggatttctcttcaacagatcagctaaggagtacctacacatctgatgga
gtccccagctctcgaggggttaagcaaagcttccagacacagctggctaccagtcacatg
atcagtcccttctctaccattcatagagcaagcccacaatccaatgtaacaacgatgtcc
gcatcaccaatctggactcaaaaccaggtaaccctgaacgaaacacctgagagttgtcga
aagacagagaaagagcatgttgactttgacgtagggtccaaccggcaggttatttggtca
acgccttaccccaaagtaccacaggatggaatttcagttgaccacttcagaccccaagat
gtccatgaagaagtcaactatgctgagcctctctcacctcccactgaagaggcaggagct
gatgttgtatcttggcttggttctgaccataaggaacaatccatgtgggatttagaaaag
gaggaagaggatcagaacatagtcagaacctgggttgctaaagacaaaccagttctagaa
cctgctatgagtcaccaggttgagatcagcttcagtatgccaactgtgttcagcactgat
gctcaagagctctacagcccttcagtgagcgatgagagagcaggttcagtgacaggggca
cattatgctttctcggcgaatgatgataatgatgtaccttttgaaatgtcttctgaaaag
gaggaacctctactagatctgccttacggtcccatgaatgcattggaggaaagagatctt
gaaacagcaaggaaagacgctgaatgggtggggaaagaaggcttggagtctgaaactaaa
tcagtgctagaacctgcatttgagaccttcacaagcagtcaagcttttgagtacaacaag
ccaaaagagttcaaccaagaggacaatatgtcatatgcatctactcaagcctcccacggt
tcagaagaggcatttcaccacgttaaaagtgtggaggaagatgttattaatctcacaaaa
gaggatgatgaaaactacatgtctaaaaaagatgaggagcaattggaagatgaattgcgc
ccctatgggtatggtaaggatgattgtgaaagattggcagggttctataacgaaaattgt
gtgacagaaagaatcgataagttcaaccgagaggcgattatctcatatgaatctgctcaa
gcttctcactggtcagaagaggtatttcaccatgttgaaagactggaggaaggtgatata
catttcacaaaaggggatgatgaaaatgatatgtataataaacgtgaggaacaatatgca
ttgcaccccaatggggatgtaaatgatgaatgggatagagtgggaggatgcaatgaagag
aatggaattagagaaggaatggatgaaggaaaggatcaagaaggaaaggatcacatgaaa
gaggaagagatgtggaataacagagaaacccaaccaaatcagtctgatcaagagcatata
ccttcaaatgtagagaaactgaatcaatttgagcaagagcatatacctttaggcagagag
aaactgaatatatccgacaatgacaaagaggatcatgatgaggcaaactactgtcaaaat
acttctgtttcgtggagggttgagctagaaggtgacagctacactcaggacaacacactg
gccgacacacaccccctgatccgttacaagagtgatgagacggatgtcaacactcaggct
tcacacatgggcgagagtgactccagtgatggtgaacaggacagggaggtatgccagaca
ggatcaggcacctggggcgaaggcaagtccaaacagtttgacaccatggaggatctgtat
gaagagtcagaaggggatgtcatagatcaggaacgtaacatgggctccactcaccaagag
gacgtggatgctagccaaacaaaggagcatgctacacaggagaacgatgaggagaatgca
gtagatcagttgattcaggaggcagaagaggaacaatcctatgaggaacttacagaacct
ggagagtactccatgatgtgctctgatgaggacaataatgaagaaagaattgatagattg
gtggagcaagagttagagaatttatctatatccagttacagtgaacactttaatgggcaa
atgattgagagcgggtcagtactgagtcttcaaattgtgtctctcactgaactttcccag
acacaagacatattatacagtgaggaggtagagcagatacactcagagagactgaatcaa
tctgaacaagagcatacgacctcaggcggagagaaactgaatcaatctgaacaagagcat
atgacctcaggcggcgaggaactgaatcaatctgagcaagaccatatgacctcaggcggc
gagaaactgaatcaatctgagcaagagcatacgatctcaggcggcgagaaactgaatcaa
tctgagcaagagcatacgacctcaggcggagagaaactgaatcaatctgagcaagagcat
acgacctcaggcggcgagaaactgaaccaatctgagcaagagcatacgacctcaggcgga
gagaaactgaatcaatctgaacaagagcatacgacctcaggcggtgagaaactgaatcaa
tccgtgcaagaatatataaattcaggcagagagaaactgaatcaatctgaacaagagtat
ataccctcaaacggagagaaaatgtatcaatccgagcaagaccatataccctcagacgaa
gagaaactgaatcaatctgagcaagagaatattcctttcagcggagagaaactgaatgaa
tctgaacaagagtatttaccctcagatggagagaaaatgaatcaatccgagccagggtac
ataacttcaggcagagagaaaccgaatctgtatgcgcaagaacatataccctcaggcaga
gagaaactgaatcaatctgagcacgagcatataccttcaaacggaaagaaactgaatcag
tctgaacaagagtatataccctcgggcggagagaaactgaatctatatgagcaagaaccc
ataccatcagacggagagaaaatgaatcaatccgagccagaatacataacttcaggcaga
gagaaaccaaatctatatgcgcaaaaacatataccctcagacagagagaaactgaatctc
acagagcaagataatatacctttaggcggagagaaactaaatcaatccgagccagggtgt
ataacttcaggcggagagaatttgaatacatctgagcaagagtatataccctcaggtaga
gaggaactgaatcaatctgagccagagtatataccctcaggtggagagaaacggaatcaa
tctgagccagagtatataccctcaggtggagaggaactgaatcaatctgagccagagtat
ataccctcaggtagagaggaactgaatcaatctgagccagagtatataccctcaggtaga
gaggaactgaatcaatctgagccagagtatataccctcaggtggagaggaacttaatcaa
cctgagccagagtatataccctcagaggttatgtattcaatgacctctaggattcgaatg
acacctgaacacacatctcttagagaaagttcagcagaaatatccaaagcagaatatttg
gctcaaagtaatgtcttcagtgaggaactgggaactgaagctataccagacaaaatagaa
ggacaggatgaccagaacctttctatactgactcatgaagactttactgaaagccattct
atccacagcagtttaaacagcaggcctgagagtcaaaccaacatgaacaactcggatata
gaagagtccaacagcacagatgatgagtctccaaatgcaagccagtatttgcaacgtgcc
aacgaagcaaatctaactgcagatcaggtagacttgttagatgtggcggtctctcactat
gaggattgcaatgctcttatagaacattctgcagaggaggtcactagctatcaggcaagt
catgaatgtcttcagacagacaaatgggaagtcttagaaagtcaaaacaaacacctggaa
tctggagatccttttgcaggtcacaagagagactcggagagatcatccaaaactgacagc
aaaggccgggacctccacagcttcctcagctctggtgtacacagcaacttctggggttcc
aatctggaaacaggagcctcctatcaaccggacgagccatatgaccatgtgaccaagcta
cccaatcagaacctagccttggctgataacctatcctgggtggatttggaatccacaggc
ggccaattggaacatgaagatggacagtga

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