Oncorhynchus nerka (sockeye salmon): 115104072
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Entry
115104072 CDS
T07952
Symbol
nes
Name
(RefSeq) nestin
KO
K07609
nestin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115104072 (nes)
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
115104072 (nes)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
COX6B
Motif
Other DBs
NCBI-GeneID:
115104072
NCBI-ProteinID:
XP_029481113
LinkDB
All DBs
Position
LG3:complement(10221825..10231737)
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AA seq
1769 aa
AA seq
DB search
MELHSLRHHHSHRTDNKLQMLNLNQRLETYLGRVRLLEEENKLLCQELQALRVSGQGGRM
GLEDKLSLARQEVEEAWREKDRVELELGSLGEELQVLGLQRRSEADAHGEVKKKLADSRK
EMEEEKRAQIWLREKVSQLEKQIQFQIQTHQEDIAGFQATLIQVRPALPSPPPQTGTQLP
SLQDLGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRLAQVGQEKIESQLKLQALE
NELYSAQDRRQCLERSVAKQRDMQRQETQNLQAHLKVLEMEKGALGNQIDTLLTESRGLM
QLKMSLGMEVATYRALLDHESLMGDFSSTDQLRSTYTSDGVPSSRGVKQSFQTQLATSHM
ISPFSTIHRASPQSNVTTMSASPIWTQNQVTLNETPESCRKTEKEHVDFDVGSNRQVIWS
TPYPKVPQDGISVDHFRPQDVHEEVNYAEPLSPPTEEAGADVVSWLGSDHKEQSMWDLEK
EEEDQNIVRTWVAKDKPVLEPAMSHQVEISFSMPTVFSTDAQELYSPSVSDERAGSVTGA
HYAFSANDDNDVPFEMSSEKEEPLLDLPYGPMNALEERDLETARKDAEWVGKEGLESETK
SVLEPAFETFTSSQAFEYNKPKEFNQEDNMSYASTQASHGSEEAFHHVKSVEEDVINLTK
EDDENYMSKKDEEQLEDELRPYGYGKDDCERLAGFYNENCVTERIDKFNREAIISYESAQ
ASHWSEEVFHHVERLEEGDIHFTKGDDENDMYNKREEQYALHPNGDVNDEWDRVGGCNEE
NGIREGMDEGKDQEGKDHMKEEEMWNNRETQPNQSDQEHIPSNVEKLNQFEQEHIPLGRE
KLNISDNDKEDHDEANYCQNTSVSWRVELEGDSYTQDNTLADTHPLIRYKSDETDVNTQA
SHMGESDSSDGEQDREVCQTGSGTWGEGKSKQFDTMEDLYEESEGDVIDQERNMGSTHQE
DVDASQTKEHATQENDEENAVDQLIQEAEEEQSYEELTEPGEYSMMCSDEDNNEERIDRL
VEQELENLSISSYSEHFNGQMIESGSVLSLQIVSLTELSQTQDILYSEEVEQIHSERLNQ
SEQEHTTSGGEKLNQSEQEHMTSGGEELNQSEQDHMTSGGEKLNQSEQEHTISGGEKLNQ
SEQEHTTSGGEKLNQSEQEHTTSGGEKLNQSEQEHTTSGGEKLNQSEQEHTTSGGEKLNQ
SVQEYINSGREKLNQSEQEYIPSNGEKMYQSEQDHIPSDEEKLNQSEQENIPFSGEKLNE
SEQEYLPSDGEKMNQSEPGYITSGREKPNLYAQEHIPSGREKLNQSEHEHIPSNGKKLNQ
SEQEYIPSGGEKLNLYEQEPIPSDGEKMNQSEPEYITSGREKPNLYAQKHIPSDREKLNL
TEQDNIPLGGEKLNQSEPGCITSGGENLNTSEQEYIPSGREELNQSEPEYIPSGGEKRNQ
SEPEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSGREELNQSEPEYIPSGGEELNQ
PEPEYIPSEVMYSMTSRIRMTPEHTSLRESSAEISKAEYLAQSNVFSEELGTEAIPDKIE
GQDDQNLSILTHEDFTESHSIHSSLNSRPESQTNMNNSDIEESNSTDDESPNASQYLQRA
NEANLTADQVDLLDVAVSHYEDCNALIEHSAEEVTSYQASHECLQTDKWEVLESQNKHLE
SGDPFAGHKRDSERSSKTDSKGRDLHSFLSSGVHSNFWGSNLETGASYQPDEPYDHVTKL
PNQNLALADNLSWVDLESTGGQLEHEDGQ
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggagctccacagcctccgacaccaccacagccaccggaccgacaacaagctccagatg
ctgaacctcaaccagcgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagctccaggccctgagggtcagtggccagggggggcggatg
ggcctggaagacaagctgagcctggccaggcaggaggtggaggaagcctggagggagaag
gaccgggtggagctggagctagggagtctgggtgaggagctccaagtcctggggctgcag
agacggtcggaggcggacgcccatggggaggtgaagaagaagctggcagacagcaggaag
gagatggaggaggagaagagggctcagatctggttaagagagaaggtgagccagctggag
aaacaaatccagttccagatacaaacccaccaggaagatattgctggcttccaggctaca
ctaatccaagtcagacctgccctgccatcccctccaccccaaacgggcacccagcttccc
agcctccaggacctgggtgaggagtactcccagatggctgtcagggcgtggcatgaggcg
gccatggtgtttcagggccaggtggacagcctggacgagtctctaaaccaggccagaacc
cggttggcccaggtgggccaggagaaaattgagagccagctgaaacttcaggccctggag
aatgagctgtattcagcccaggatagaaggcagtgtctggagaggagtgtggccaaacag
agagacatgcagaggcaagagacacaaaacctgcaggcccatctgaaggtgttggagatg
gagaagggggcgctgggaaatcagattgacactcttctgacagaaagtaggggtctgatg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggaccatgaa
agtctgatgggggatttctcttcaacagatcagctaaggagtacctacacatctgatgga
gtccccagctctcgaggggttaagcaaagcttccagacacagctggctaccagtcacatg
atcagtcccttctctaccattcatagagcaagcccacaatccaatgtaacaacgatgtcc
gcatcaccaatctggactcaaaaccaggtaaccctgaacgaaacacctgagagttgtcga
aagacagagaaagagcatgttgactttgacgtagggtccaaccggcaggttatttggtca
acgccttaccccaaagtaccacaggatggaatttcagttgaccacttcagaccccaagat
gtccatgaagaagtcaactatgctgagcctctctcacctcccactgaagaggcaggagct
gatgttgtatcttggcttggttctgaccataaggaacaatccatgtgggatttagaaaag
gaggaagaggatcagaacatagtcagaacctgggttgctaaagacaaaccagttctagaa
cctgctatgagtcaccaggttgagatcagcttcagtatgccaactgtgttcagcactgat
gctcaagagctctacagcccttcagtgagcgatgagagagcaggttcagtgacaggggca
cattatgctttctcggcgaatgatgataatgatgtaccttttgaaatgtcttctgaaaag
gaggaacctctactagatctgccttacggtcccatgaatgcattggaggaaagagatctt
gaaacagcaaggaaagacgctgaatgggtggggaaagaaggcttggagtctgaaactaaa
tcagtgctagaacctgcatttgagaccttcacaagcagtcaagcttttgagtacaacaag
ccaaaagagttcaaccaagaggacaatatgtcatatgcatctactcaagcctcccacggt
tcagaagaggcatttcaccacgttaaaagtgtggaggaagatgttattaatctcacaaaa
gaggatgatgaaaactacatgtctaaaaaagatgaggagcaattggaagatgaattgcgc
ccctatgggtatggtaaggatgattgtgaaagattggcagggttctataacgaaaattgt
gtgacagaaagaatcgataagttcaaccgagaggcgattatctcatatgaatctgctcaa
gcttctcactggtcagaagaggtatttcaccatgttgaaagactggaggaaggtgatata
catttcacaaaaggggatgatgaaaatgatatgtataataaacgtgaggaacaatatgca
ttgcaccccaatggggatgtaaatgatgaatgggatagagtgggaggatgcaatgaagag
aatggaattagagaaggaatggatgaaggaaaggatcaagaaggaaaggatcacatgaaa
gaggaagagatgtggaataacagagaaacccaaccaaatcagtctgatcaagagcatata
ccttcaaatgtagagaaactgaatcaatttgagcaagagcatatacctttaggcagagag
aaactgaatatatccgacaatgacaaagaggatcatgatgaggcaaactactgtcaaaat
acttctgtttcgtggagggttgagctagaaggtgacagctacactcaggacaacacactg
gccgacacacaccccctgatccgttacaagagtgatgagacggatgtcaacactcaggct
tcacacatgggcgagagtgactccagtgatggtgaacaggacagggaggtatgccagaca
ggatcaggcacctggggcgaaggcaagtccaaacagtttgacaccatggaggatctgtat
gaagagtcagaaggggatgtcatagatcaggaacgtaacatgggctccactcaccaagag
gacgtggatgctagccaaacaaaggagcatgctacacaggagaacgatgaggagaatgca
gtagatcagttgattcaggaggcagaagaggaacaatcctatgaggaacttacagaacct
ggagagtactccatgatgtgctctgatgaggacaataatgaagaaagaattgatagattg
gtggagcaagagttagagaatttatctatatccagttacagtgaacactttaatgggcaa
atgattgagagcgggtcagtactgagtcttcaaattgtgtctctcactgaactttcccag
acacaagacatattatacagtgaggaggtagagcagatacactcagagagactgaatcaa
tctgaacaagagcatacgacctcaggcggagagaaactgaatcaatctgaacaagagcat
atgacctcaggcggcgaggaactgaatcaatctgagcaagaccatatgacctcaggcggc
gagaaactgaatcaatctgagcaagagcatacgatctcaggcggcgagaaactgaatcaa
tctgagcaagagcatacgacctcaggcggagagaaactgaatcaatctgagcaagagcat
acgacctcaggcggcgagaaactgaaccaatctgagcaagagcatacgacctcaggcgga
gagaaactgaatcaatctgaacaagagcatacgacctcaggcggtgagaaactgaatcaa
tccgtgcaagaatatataaattcaggcagagagaaactgaatcaatctgaacaagagtat
ataccctcaaacggagagaaaatgtatcaatccgagcaagaccatataccctcagacgaa
gagaaactgaatcaatctgagcaagagaatattcctttcagcggagagaaactgaatgaa
tctgaacaagagtatttaccctcagatggagagaaaatgaatcaatccgagccagggtac
ataacttcaggcagagagaaaccgaatctgtatgcgcaagaacatataccctcaggcaga
gagaaactgaatcaatctgagcacgagcatataccttcaaacggaaagaaactgaatcag
tctgaacaagagtatataccctcgggcggagagaaactgaatctatatgagcaagaaccc
ataccatcagacggagagaaaatgaatcaatccgagccagaatacataacttcaggcaga
gagaaaccaaatctatatgcgcaaaaacatataccctcagacagagagaaactgaatctc
acagagcaagataatatacctttaggcggagagaaactaaatcaatccgagccagggtgt
ataacttcaggcggagagaatttgaatacatctgagcaagagtatataccctcaggtaga
gaggaactgaatcaatctgagccagagtatataccctcaggtggagagaaacggaatcaa
tctgagccagagtatataccctcaggtggagaggaactgaatcaatctgagccagagtat
ataccctcaggtagagaggaactgaatcaatctgagccagagtatataccctcaggtaga
gaggaactgaatcaatctgagccagagtatataccctcaggtggagaggaacttaatcaa
cctgagccagagtatataccctcagaggttatgtattcaatgacctctaggattcgaatg
acacctgaacacacatctcttagagaaagttcagcagaaatatccaaagcagaatatttg
gctcaaagtaatgtcttcagtgaggaactgggaactgaagctataccagacaaaatagaa
ggacaggatgaccagaacctttctatactgactcatgaagactttactgaaagccattct
atccacagcagtttaaacagcaggcctgagagtcaaaccaacatgaacaactcggatata
gaagagtccaacagcacagatgatgagtctccaaatgcaagccagtatttgcaacgtgcc
aacgaagcaaatctaactgcagatcaggtagacttgttagatgtggcggtctctcactat
gaggattgcaatgctcttatagaacattctgcagaggaggtcactagctatcaggcaagt
catgaatgtcttcagacagacaaatgggaagtcttagaaagtcaaaacaaacacctggaa
tctggagatccttttgcaggtcacaagagagactcggagagatcatccaaaactgacagc
aaaggccgggacctccacagcttcctcagctctggtgtacacagcaacttctggggttcc
aatctggaaacaggagcctcctatcaaccggacgagccatatgaccatgtgaccaagcta
cccaatcagaacctagccttggctgataacctatcctgggtggatttggaatccacaggc
ggccaattggaacatgaagatggacagtga
DBGET
integrated database retrieval system