Oncorhynchus nerka (sockeye salmon): 115104230
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Entry
115104230 CDS
T07952
Name
(RefSeq) ELAV-like protein 3 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115104230
03041 Spliceosome [BR:
one03041
]
115104230
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115104230
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115104230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
RNA_bind
Motif
Other DBs
NCBI-GeneID:
115104230
NCBI-ProteinID:
XP_029481382
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Position
LG21:23774394..23793933
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AA seq
395 aa
AA seq
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MSRMVTQIISTMETQVSNGPSGTSLPNGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKS
LFGSIGEIESCKLVRDKITGIHDASAGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTI
KVSYARPSSASIRDANLYVSGLPKTMTQKDMEQLFSQYGRIITSRILVDQVTAGISRGVG
FIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGP
LHHQTQRFSLIPPFGKGPDPNNSTKPILDNLLNASYGVKSSPSLLPRFSPITIDSMTSLA
GVNLTGPTGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM
TNYDEAAMAIASLNGYRLGDRVLQVSFKTSKQHKA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaatggttactcagataatcagcaccatggaaacccaggtgtccaacggtccg
agcggaaccagcctgcctaacgggccagtcatcagcaccaacggtgccacagacgacagc
aagaccaacctaatcgtcaactacctgcctcagaacatgacccaggaagaattcaagagc
ctgttcggtagcatcggagagattgaatcctgcaaactggtccgagacaagattacaggt
attcatgatgcttcagcaggccagagtttgggctatgggttcgtaaactatgtggatccc
aatgacgcagacaaggccatcaacactctcaacggtctcaaactgcagaccaaaacaatt
aaggtatcgtacgcccgccccagttcagcatctatccgtgatgccaacctgtatgtgagc
ggtctgcctaagaccatgacccagaaggacatggagcagctgttctcccagtacggacgc
atcatcacctcccgcatcctggtggaccaggttacagcaggtatatcgcgaggagtgggc
ttcatccggtttgacaagcggaacgaggcagaagaggccatcaagggcctgaacggccag
aagcccctgggcgcagccgaacccatcacggtgaagttcgccaacaaccccagccagaag
acgggccaggccctgctcacccagctgtaccagaccgctgcacgccgctacactggccct
ctgcaccaccagactcagcgcttcagcctcatccctccatttggaaagggaccagatcca
aataacagcacaaaaccaatactcgacaatttactaaacgccagctacggagtcaagagt
tctccctctcttcttcctaggttctcccccatcaccatcgacagcatgaccagcctggcg
ggagtcaacctgaccgggcccaccggagccggctggtgcatcttcgtctacaacctgtcg
ccagaggctgacgaaagcgtcctgtggcagctgttcgggcccttcggcgccgtcacaaac
gtcaaggtcatccgtgacttcaccaccaacaaatgtaagggcttcggcttcgtcaccatg
accaactacgacgaggcagccatggccatcgctagtctcaacggctaccgcttgggagac
cgcgtgctgcaggtctccttcaagaccagcaagcaacacaaggcctga
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