Oncorhynchus nerka (sockeye salmon): 115104240
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Entry
115104240 CDS
T07952
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115104240 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115104240 (gtf2e1)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
115104240 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
115104240 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
115104240
NCBI-ProteinID:
XP_029481472
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Position
LG1:14828976..14875404
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AA seq
453 aa
AA seq
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MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
GSSYADLYTQNVEISMGEQEEQQQRRQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNS
GDDAGGAQVGVVGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVAAGGGAIAAARGSD
SESDTSESDEDSPTAPPPVAAAQRRPTGMEMEEEEDDDEFEEVGADESMVMVGGRSFSYR
EVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcgctgaagcgcctggccaagcag
gtagtgcggggcttctacggggtggagcatgccctggctctggatgtccttatccgcaac
ccctgcgtccgcgaggaggacatgctggagctgctcaagtttgaccgaaagcagctgcgc
tcggtgctcaatacgctcaagggcgataagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgcctgctggtc
aatgtggtcaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaaccgggcgtcgttccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcaactgtttgaccccatgacagggacgtttcgctgtacgttctgtcagacggag
gtagaggaggacgagtctgcggtgcccaagaaggatgccaggaccctggtggcccgtttc
aacgaacaaatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccccgccctcaaacagagccgggaccgt
gcggcggcggcagcgggtgcagctgccggcggtccccaccgcgaggcctggtccaccaag
ggctcgtcctacgccgacctgtacacccagaatgtggagatcagcatgggggagcaggag
gagcagcagcagcgccggcaagccagcgaggggaaggcacccagggagagacccgtgtgg
ctgacggagagcactgtgcatggaggaacgtacagcgagccagacccactcaagaactcc
ggagacgacgcgggaggagcccaggtgggcgtggtcgggctcggcggcggccaatcggat
gagaacgaggaagtgatgcgcgccctgctcatccatgagaagaggagcggtgccgggccg
gcaggaggtggagccgtagcggcaggaggcggagccatagcggcagccaggggcagcgac
tcggagagtgacaccagcgaatcagacgaggactctcccacggctccgccgcctgtggca
gcggcccagcggcggccgacgggcatggagatggaggaggaggaggatgatgacgagttt
gaggaggtgggggccgatgagtccatggtgatggtgggggggcggtcgttctcctatcgg
gaggtgagccagaggccagagctagtggagaagatgagctctcaggagaaagaggcctac
atcgagatgggacagaacatcttccaagagatgtacttctga
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integrated database retrieval system
