Oncorhynchus nerka (sockeye salmon): 115104264
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Entry
115104264 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: ras/Rap GTPase-activating protein SynGAP-like
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PH_2
Motif
Other DBs
NCBI-GeneID:
115104264
NCBI-ProteinID:
XP_029481482
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All DBs
Position
LG3:complement(10838763..10950695)
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AA seq
1564 aa
AA seq
DB search
MSYVPFQDARCAVPPSYRPHAPSFAAPSYDRPDWNPRLCVISGNQLYMLDQEEVHPLLMR
ERRSELHRNKLLRRTVSVPVEGRHHPEMENARARRKSIANVKQPSMEIPPTAPPQPFRQS
VSTPPSSRPRSLPPSLSLSLPFSPSHPLSPPPSPHGHSCPQQRYKKGVGTPPLPRSLPLS
PCLSLSLPLSPPSSNWPGDWRVAASSPVTRRHIAPLPPIESFLSRRLKGSIKRAKSQPKL
DRTSSFRHMILPRFRSADQDRTRLMQSFKESHSHESLLSPSSAAEALDLTLDEDAIIKPV
HSSILGQEYCFEVTTASGTKCFACRSGAERDKWIENLQRAVKPNKDNSRRVDNVLKLWII
EARELPAKKRYYCELCLDDMLYARTTSKPRTDTVFWGEHFEFNNLPAVRNLRLHLYKETD
KKRRKEKSTYLGLVSIPISSITGRQFVEQWYPVIQPSILAKGQAGGKIINASLRLKSRYQ
TMSILPMELYKEFAEYVTNNYRTLCAVLEPLLSVKSKEEVACALVHILQSTGKAKDFLSD
MAMCEVDRFIDREHLIFRENTLATKAIEEYLKLIGHKYLKDAIGEFIRALYESEENCEVD
PMRTPPSVLPDHQANLRMCCELALCKIVNSHCVFPRELKEVFASWRVRCAERGREDIADR
LISGSLFLRFLCPAVMSPSLFNLTQEYPDEQTSRTLTLISKVVQNLANFSKFGMKEEYMC
FMNEFLEMEWGSMQQFLYEISNLDSVSNAGGFEGYIDLGRELSILHSLLWEVMAQLSKDA
IIKLGPLPRLLNDISMALRNPHLQRQPSHQNQTDRVHERQTERLLSRPSFNRGVSSEFQN
LMMKDLNSSIDITRLPSPTSGVSGGGVMPSRAHPQLSFQERDHPHRASKDVFYVTRPPLA
RSSPAYCTSSSDITEPDHKDSTMNSVSNLQSVAMLNSSQASITGMGSFGGLSSQGGGGLG
SGLSGQLRAGGRLSAGSGGSSMSGGLRLSQLSQMGTTTDSLSQQQQQQAAALRYPLSFQN
PLFHLATGTADGPHLHHQHSRAHLPPPLLLAPEPDPGGSHEAYIPQFAHGGFSRSEDLST
LRTGAGHLGQPAIIHSHSYSDDYSRADFARRQLSMHGQDNLQQQQQMGMASQTGTSHSSL
ATPPSTVQPVRQSSIAPPPAQRVKSQTSHQLSVSAAAAPTPSAKTRPPSANLSPESGYGG
RQQAPRQQLSVKDNTAPGLPHQQSSVRESQGPQGSQGGTTTTIQQSQQQQQQPQQQHLLK
PSISKQGSGQSPSTLNPPTPANERTVAWVSNMPHLSADITLEANRIDREEFKLKEYSKSM
DESRLDRVKEYEEEIHSLKERLIMSHRKLEEYEKRLLSQEQQTSKILSQYQCRLEDSERR
LRQQQVEKDSQIKGIINRLMAVEDEIRGGAIIEPPKANVRVFADQGAQHSSLGSADPCVN
TEGGRGGGGEKEGEKEGGVTTDPDPTISSSGISSTSLPRNENGVPSSPVDPPPPPTPHLH
PNPPQNGELRGNPTSSPVTSTEAAESTTTAGLGIEEREQVKNNTKPNQREKTQIKKSCHI
SFLF
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgttccctttcaagatgcgaggtgtgccgtccccccctcctatcgcccccat
gccccttcctttgccgctccctcctacgaccgccccgactggaacccccgtctctgcgtg
atctccggaaatcagctctacatgttggaccaggaggaggtacaccctttgttgatgcgc
gagcggcgctccgagttgcacaggaacaagctgctgcggaggacagtcagcgttcctgtt
gaggggaggcaccatccagagatggagaacgctcgcgcccggcggaagagcatagccaac
gtgaagcagccaagcatggagatccctcccactgcccccccccaacccttccgacaatcc
gtgagtacccctccctcctcccgccctcgctcgctccccccgtccctctctctctccctc
cctttctcgccctctcaccctctctctccccctccctccccccatggccactcctgccct
cagcaacgctacaagaaaggggtcggtactccccctctccctcgctcgctgcccctctcc
ccctgcctgtctcttagtctccccctctcccccccttcttctaattggccgggggactgg
agggttgccgcttccagcccagtgaccagacgccatattgcacctctgcctccgatcgag
agtttcctcagtagaaggttgaagggctctatcaagagggctaagagtcagcccaaactg
gaccgcaccagcagcttccgacacatgatcctcccccgcttccgcagtgccgaccaggac
agaacgcgcctgatgcagagcttcaaagagtcccactcccatgagtccttgctgtctcct
agcagtgcagccgaggcgctggacctcaccctggacgaggatgccatcatcaagcccgtc
cattccagcatcctgggacaggagtactgtttcgaggtgactacggcttcgggaaccaag
tgctttgcatgtcgctcgggtgcagagagagacaaatggatcgagaatcttcagagagct
gtcaaacccaacaaggacaacagtcggagggtggacaacgtgctgaaactctggatcatc
gaggcgcgggagcttcccgccaagaagcgctactactgcgaactttgtctggacgacatg
ctttacgcacgcaccaccagcaagccccggactgacaccgtgttctggggcgaacacttt
gagttcaacaacttgccagccgtccgcaacctacgccttcatctctacaaggagactgac
aagaagagacgcaaggaaaagagcacatacctgggactggtcagtatccctatctccagc
atcacaggccgacagtttgtggagcagtggtacccggtcatccagcctagcatcctggcc
aaggggcaagcagggggcaagatcatcaatgcctccctacgcctcaagtctcgttaccag
accatgagcatcctgcccatggagctgtacaaggagtttgccgagtatgttaccaataac
taccgaactttgtgtgcggtgctagagcctctactgagtgtgaagagtaaagaagaggtg
gcctgtgcgctggtccacatattacagagcacggggaaagcaaaggattttctttcagac
atggcgatgtgtgaggtagatagattcatagaccgagaacaccttatcttcagagagaac
actctggccaccaaagccatagaagagtatctcaagctgattggacataagtacctcaag
gatgcaataggtgagttcataagggcgctgtacgaatcagaggagaactgcgaggtggac
cccatgaggacaccgccctctgtccttccagatcaccaagccaatctccgtatgtgctgc
gaactggcactctgcaaaatcgtcaactcccattgtgtgtttcctcgagagctgaaggag
gtgtttgcctcgtggagggtgcgctgtgcagagagggggagggaggacatcgcagaccgc
ctaatcagcggctccctattcctgcgcttcctgtgtccggccgtcatgtccccctccctg
tttaacctgacccaggagtacccagacgagcagacgtcgcgcacgctcaccctcatctcc
aaagtggtgcagaacctggccaacttctccaagtttggtatgaaagaggagtacatgtgc
ttcatgaatgagttcttagagatggagtggggctccatgcaacaattcctctatgagatc
tccaacctggacagtgtgagcaacgcggggggtttcgagggctacatcgacctgggcagg
gagctgtccatactgcacagcctcctctgggaggtcatggcccagctcagcaaggatgcc
attatcaaactgggtcccttgccccgcctcttgaatgacatcagcatggccctacgtaac
ccccacctgcagaggcaacccagccaccagaaccagacagatagagtccatgagagacag
acggagaggctgctctcacgacccagcttcaacaggggagtctcctcggagttccagaat
ctcatgatgaaggatctcaacagctccatagatatcactcgcttgccttcccctacatct
ggtgtgtccggtgggggggtcatgccgtctcgtgctcatcctcagctgagtttccaagag
cgtgatcacccacatcgagcctccaaagacgttttctatgtaacacgccctcccttggcc
cgatccagccctgcctactgcaccagtagctccgatatcacagagccagaccacaaggac
tccacaatgaacagcgtgtctaacctgcagtcggtggccatgctcaactcctcccaggcc
tccatcaccggcatgggcagcttcggagggctcagcagccagggtggaggaggcctgggc
tcgggcctgagtggtcagctccgggccggaggccgcctctcggccggctcggggggatcc
agcatgtcagggggcctccggctgagccagttgagccagatgggcaccaccaccgactcg
ctgtcccagcagcagcagcagcaggccgccgccctgagatacccactctccttccagaac
cccctgtttcacctggccaccggcactgcagatggaccccaccttcaccaccagcacagc
agggcccatctcccgccgcccctgctcctggccccggagcctgatcccggtggctcgcac
gaggcgtacatcccccagttcgcccacggggggttctctcgcagcgaggacctgtccacc
ctgaggaccggggcagggcacctggggcagccagccattatccactcacacagctatagc
gacgactacagcagggctgatttcgcacggcggcaactgtccatgcacgggcaggataat
cttcaacagcaacagcagatgggcatggcctctcagactggtacctcccactcctccctg
gccacacccccctccacagtccagcctgtgcgccagagctccattgccccgcctcccgct
caacgcgtcaaatcacagacctcccatcagctgtccgtcagtgcggctgctgctcccaca
ccatccgctaagacgcgaccgcccagtgccaacctatcaccagagtcgggctacggaggt
cggcaacaggcaccacggcaacagctgtcggtcaaagataacacagcccctggactgccc
caccagcagagctctgtcagggagagccagggcccccaggggtcacagggaggcactaca
acaaccatacagcaatcacagcagcagcaacagcaaccacagcaacagcacctgctcaaa
ccttccattagtaaacagggttccgggcagtcgccctcgacccttaaccccccgaccccg
gccaatgagagaacagtcgcctgggtctccaacatgcctcacctctccgctgacattact
ctggaggctaaccgcatcgaccgtgaggagttcaagctgaaggagtactccaaaagcatg
gatgagtctcgcttagacagggtaaaggaatacgaggaggagatccactccctgaaggag
cgactgatcatgtcccacaggaagctggaggagtatgagaagaggctcctttcccaggag
cagcagaccagtaagatcctctcacaataccagtgtcgcctggaggacagcgagaggagg
ctacggcaacagcaggtggagaaagactcccaaattaaaggaataatcaacagacttatg
gctgtggaggacgagataaggggaggagccatcattgagccgccaaaagctaacgttagg
gtcttcgccgatcagggggcccagcattcctccctgggttcagcagacccctgtgtgaat
actgaaggtggaagagggggaggaggagaaaaagaaggcgaaaaagaaggaggggtgacc
actgatcctgaccctactatctcttcctcgggcatctcctccaccagcttgccccggaat
gagaatggagtcccctcctcacccgtagaccctcctcctccccccactcctcatctccat
cccaatccaccccagaatggagagctccgtggcaaccctacatcctccccagtgacaagc
acggaggcagctgagagcactacaacagcaggactgggcatagaggagagggagcaggtc
aaaaacaacacaaaaccaaatcagagagagaagacacaaataaaaaagtcttgccacatt
tccttccttttttga
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