Oncorhynchus nerka (sockeye salmon): 115104269
Help
Entry
115104269 CDS
T07952
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115104269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115104269
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115104269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
DUF4611
BUD22
BSP_II
CobT
Nop14
Motif
Other DBs
NCBI-GeneID:
115104269
NCBI-ProteinID:
XP_029481490
LinkDB
All DBs
Position
LG21:complement(24713833..24719213)
Genome browser
AA seq
566 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAITEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDALREVMDGLNMRDLLGSLSDD
EGEPEEEDDEDEEEDDYEEEEEDDDVEEEDSSVNQVSSPLSVPRPPDASSFLCFPSPDKL
LKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDKDVKSAVLDSIDAILRKAFASP
SFQGYNFISSLLVMLGLLKSEDKVKPVRVVPGHLQALEYVVRQDYFPQDHIAVLEAFMSR
HVQALESCSSARNILKSTLEQVRPEN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatgctgttgcacagttggccgactctctggccaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagaaatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatacctccagccctg
aactccctgggtgcggccctgatgacagcaggcgccagactgaccgtgctggaccttagt
gacaatgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctc
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggagtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgtagtgtccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcaatcactgaggggcttcccatcctcaaggagctgaatctg
tcattcggggagatcacaggagaagctgcactgctggtggcacaatcagtcgagggcaaa
gccacactggagaaactggacctaaatggtaactgcctgggggaggagggctgtgatgct
ctcagagaggtaatggatggcctgaacatgagagacctgctgggatcactcagcgacgat
gaaggggagccggaggaggaggatgatgaagatgaggaggaggatgactatgaggaggag
gaggaggatgatgatgtggaggaagaagacagcagtgtgaatcaggtttcctcccctctg
tcagtgccccgacccccagatgcctcctccttcctctgcttcccatcccccgacaagcta
cttaaactgggcaccaagagggccctgctctttgaacagcaggtagatgtggcggatgct
ggtaagacagcggaggcattcctgaaaatctcctctgtgtacaatgaggaagataaagat
gttaagagtgctgtcctagacagtattgatgcaattcttaggaaagccttcgcaagcccc
tccttccaaggttacaactttatatcatcgctgttagtaatgctgggactcctcaagagt
gaggacaaggtgaagccggtgcgtgtggtacctgggcatttgcaggccctggagtatgtt
gtgcgtcaggactacttcccccaggaccacattgccgtgctggaggccttcatgtcccga
cacgtccaggccctggagtcgtgcagcagcgccaggaacatcctcaagtccacgctggag
caggtcaggcctgaaaactga
DBGET
integrated database retrieval system
