Oncorhynchus nerka (sockeye salmon): 115104272
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Entry
115104272 CDS
T07952
Name
(RefSeq) protein Tob2-like
KO
K14443
protein Tob/BTG
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115104272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115104272
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115104272
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115104272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
115104272
NCBI-ProteinID:
XP_029481493
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Position
LG21:complement(24772575..24779681)
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AA seq
403 aa
AA seq
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MHLEVKVALNFIVSYLYNKLPRRRADLFGEELEQILLSHYEGHWYPEAPLRGSAFRCLHL
GAPSDPVVELAARRSGLDTEEVRANVPPELSVWIDPYEVSYQIGEKGAVKVLYFEDPSGL
GGEGEMVEVVSGVSKGDMEVEEAKSLGFNPEAQVFVPIGAQISPVLLPSLSSTPAPLSAS
SCPVIFSYPSSSTPTNPTAHSSNTSTPSPPSGGLPYPPSQQPTVALPSTRPPLQPITFTT
ASFAATKFGSTKMKKCGGSGSAGGSGVGVPPPQRMLARSPTNISPPGLLKHKPLSVSLHS
LGVQIPSQLSPNAKEFVYPASPGPLYFDNDAPLILSHSSPFQHPHPTHPSFDPFSSPPPG
PAVGVIGGSGGISYMEQPSFVEGIGGYNLQYPSQAFQPVVLAN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcacctagaggtaaaggtagctctgaatttcattgtgtcctacctgtacaacaaactg
ccccgtcgtcgtgctgacctcttcggggaggagttggagcagatactgttgtcgcactat
gaaggccactggtaccctgaagctcctctgcggggctctgccttccgctgcttgcaccta
ggggcccccagtgacccagtggtggagctagctgccaggagaagtggactggacacagag
gaagtgcgtgccaatgtcccccctgagctgagtgtgtggatcgacccctatgaggtgtcc
taccaaatcggggagaagggagccgttaaggtcctgtactttgaggatccatccggctta
ggtggagaaggcgaaatggtggaagtagtaagtggagtgagtaaaggggacatggaggta
gaggaggccaagagcttagggttcaaccctgaggcccaggtgtttgttccaattggagcc
cagatatctccagttctgcttccttccctctccagcacacccgcacccctctcggcctca
tcctgcccagtgattttcagctatcccagctccagcacacccacgaacccaactgcccac
tcctctaacacatccacaccttcccctccaagtgggggactcccttaccccccctctcag
cagccaacggttgccctgcccagcacccgtccaccgctgcagcccatcaccttcaccacg
gccagtttcgccgcaacaaaatttggctccaccaagatgaagaagtgtggcggttccgga
tcggctggcggctcgggtgtaggcgtgcccccgccacagaggatgctcgcccgttccccc
accaacatctctcccccagggctgctgaaacacaagcccctctcagtctccctgcactcc
ctgggggttcagatccccagccagctctctcctaatgccaaagagtttgtttacccggca
tccccagggcccctatactttgacaacgatgctccgctcatactttcacactcaagcccc
ttccagcaccctcaccccacccacccctcatttgacccattctccagccccccacctggt
ccagctgttggtgtcattggtggcagcggtgggatttcttacatggagcagccctcattt
gtggaaggtataggggggtataacctgcaatatcccagccaggccttccagccagtggtg
ctggccaactaa
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