Oncorhynchus nerka (sockeye salmon): 115104275
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Entry
115104275 CDS
T07952
Name
(RefSeq) transcription factor 20-like isoform X1
KO
K24769
transcription factor 20
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115104275
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115104275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
115104275
NCBI-ProteinID:
XP_029481498
LinkDB
All DBs
Position
LG21:25032694..25058464
Genome browser
AA seq
2546 aa
AA seq
DB search
MQNFPNSPAPPALPPGFTSRGGGGPSYPPPSTDPQISPRMTDDYTGMQQQTPLNPQSHSR
HLLHRGHHHHSQAGHMLAYDARNRAGESSHGNIHSGSSSNPYQKETMDYYFAMGGKDRHR
RGGMAYGAGFGYSNMDGHIPQQYRQAGTSSSGMMSPYPLDYGSTAGSGGSSSGSSGAGAF
SPSHQYKMGQNPAMQPASGPQMQHRQHGQNYPAHQALQHGQQHRTYPISGHRMPPQFSHY
SPQGSASTGSSGMYSSPPQRYHDGASSGGGFEPKVNSSPNMNSNSNSISSSATTNNVGSL
ENVTQSYHSSSYPSYSPQTHPLHKQATLQDRNSQHNLGVGYDNSLKMQHHAPPPGSVYSK
HHQSTNPGMPQQPCQEISKSPMHSQPQQGQINQNFSPISNPSPAASAVQSPSCSSSPSPL
MGVSEGHGNPLCPPHVPSHPPPPNPRSCRGRLLQTLPQLSPTPNSNSSISSCGSSGSNKA
TGLNTSAGGGHLVSNRSRMAAGTGKGSHEEGSSSSVYSSSPLDKLMQDPGLNSLNALTSQ
VANLPNTVQHMLLTDTLMSHRRGKDGQSQMLQALQAIPSTQPRSRSVSAASSSGIGGGEG
ASSEAGGDEDSFLVSERVSSRAKEERDEQISEGGESRMRQMSGTSSGSEPTGYYPPPSQS
QICIGSSKNQSHTGKSDQGSQGKRMFTESSTKQSLNPSDVSERKTTETRTPSLSSPSSAP
QSAEPGPSVHSRPPVSSTPSCPIPSPAPQFHANCVSEPGATDVNTKNGLRKTREIKYEGI
KEESGGMIEKGTHGADPREQTREGHMRQDGQDKENKLDRSSFRNKKGDEKDGKRCKTRDL
DNSNQDQNIEEQTNAGGVGVIVSTRCEVNHPEKATCAQDNCIEEKHSDSFFRESSRHNGE
EGMDLSLYSSHHEVPQKSNFGRSVPQNHPPSGPQKYGYQESPHGAAMGLKNRGRPSPGSV
TGSNSRYQGFHQPKPSYAPEHTKDVAGTTVEGSVRRREGSGARGHDDNSQLQHPFPSLLQ
EVLQGYHLDRRYGRSEQALTAHLQAQNMTRQQYQTRHPYGMAESMRTQTGVGEVTSHPSR
MTSPGKPLQLNQRQGPGSDFVPESPQSSLRSEGVDTKGSHSASSEKNKMATPQRHLSHMP
QSTEFLSGPPPKHINLADYSLPHRKPPSGLPSSSSAVQELLLQKTEPLAGSVGTIGQIES
QMLTSSLLPPSKERRSVICDVCPNRRCTPEREREKSPIGASVIQLPSTNDLGNSKELGDK
KEVGVKVASKETAEAVHHSGLTTKETDVEHHKKALHPSVVKNAEPLRRCKIDLTTTMPSQ
HLQQTSHYPSTTNPLSPPSRHQSYPHGVDLSAGHASGFPGSRFGDTREGNMMPRNPHFHN
PYHSPQVHLQNPQSANKLQMYTHLHAHDLDDRLDWAATINRPTKDLMQSSTSPGRHKLSH
SEQRQRMQSPTDILHNRQPFAKQQVPHQNTYYDMKMWESTHSGRESVGMLEGDPYQRSQQ
PPPAAPLGSVAPQLVPTAPPVSNILESPVSQVVTEEIFKSLHPTPNSMKTVGPSIGGNVN
SVMPQSHRSNKTGGSGDTNPLMLRRRVRSFISPIPAKRQHQDVSQQRSAPSSYHSPLTYS
ESSLQNDDDSSSSDITTLGSPNTPCPTPGQSTYSQSSSPVQGKKSLPPRKGRGLKLEAIV
QKITPNVKKSTNSGHTDVDSNDFAGFSHTEMSQFTDTQDEEECLPYLDESLSLSDIMPYR
GVDETGPLPPTAYPCDPHQTSQVLKRGTTGTVTRPLQPDFDFGLGTAASSTGDRDKEMPA
DFTLLGPLPPPPPLPCPVQGSPPPSSSALSDIQHFTNTYQQLETRRGEQSAANLLRQKLE
ETGIGFDDYSSSDYYGTTPPHHSQAQGHLLRQPHQTSPRSSLAMTGSPQDSKQSDSSVPK
GYFPSGKKKGRPVGSVNKQKRAQASQAQAQNASPSALSGPPIHSPATVSPQVAPSPSTTA
SAPSVTPPTDQKMTLPEIPPVLTQAVKVDAESEDTQPEPEVISVCQEQGGVKDESEVVGS
RGRQRRRRRGVAAAAAKDDLEAATRAGEHFDNSRVFPDNSKCAFAPYIHVERKVAEIGAV
CTIVNGEEEKMKGERGAVGGKASSSGIEALLTSALLSQLPRRDGEIERVKEKRELDVDSA
LQAGKVLPSSEYLLPGPVITESIHSGRLLCCLCQKWANYKNLGDLYGPYYPPEYATRLPK
NQPQIRQSLVTTGMSRNVQNLDTISNVLTTQGPELQDVPIIKSSTYSDCMFNQETNTTSP
ATAVGTASPAGGGEMLYLASKLAKTTTNKTTVLNWDMPPELKPITELRKQPELQNEPTYS
QQNQPCQQQQTEDTQQRPQHRKLTSHPRFKRRQKSSENSPRMVPSNSKASLPFQPPPPTL
DSLGPLAQLAQLPQMPMDPEELWVHEACMVWTSGVYLVNGRLYGLQEALDGARDTVCSYC
EMVGSTLGCYSKGCTLRYHYPCAMDADCSLNEDNFSLRCPKHKVKKESFPRAASQLNLCT
LSSLREAERDTEEEETQEYRIGMFGR
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttccccaacagtccagcacctccagctcttcctcctggatttactagtagg
ggtggaggtggcccctcttacccaccaccatcaacagatccccagatatccccaaggatg
acagacgactacactgggatgcaacagcaaacacccctaaaccctcaaagtcacagtcga
cacctactccatcgagggcaccaccaccatagtcaagctggccatatgcttgcttatgat
gcaagaaacagagctggggaatcatcacacggtaatattcacagtggcagtagtagcaac
ccttaccaaaaggaaacaatggattattattttgcaatgggtggaaaggacagacataga
agaggaggtatggcatatggggcaggttttgggtactcaaatatggatggacatatacct
cagcagtacagacaagctggaactagctcctccgggatgatgtctccctatcctttggac
tatggttcgacggccggctcaggtggtagtagcagtggcagcagtggtgctggagcattt
tccccctcccatcagtacaaaatgggtcagaaccctgcaatgcagccagcatcagggcct
cagatgcagcaccgccaacatggacagaattaccccgcccatcaagctctgcaacatgga
cagcagcataggacttatcccatctctggacacagaatgcctccacagttctcacactac
tccccacagggtagtgcatccacagggtcatcaggaatgtacagctccccaccacagaga
tatcatgatggggccagcagtggtggtggatttgaacctaaagtcaacagctctccaaat
atgaactctaattcaaactcaatttcaagttcagctacaacaaacaatgttggatcactg
gagaatgttacacagagttaccactcttcaagttacccctcatactccccacaaactcat
ccactccacaaacaagccaccctccaggaccgcaattctcagcacaatttaggagtaggt
tacgacaattctctcaaaatgcagcatcatgcccctccaccaggttctgtatactctaaa
catcaccaatccaccaatcccggaatgcctcaacaaccgtgtcaagaaatctccaaatcg
ccaatgcactctcaaccccaacagggccagattaaccaaaacttcagccctatatcgaac
ccctctccagctgcctctgcagtgcagtctcccagttgtagctcctcaccttccccgttg
atgggtgtctcagaaggtcatgggaaccctttatgtcccccacatgttccatcacatcct
cctcccccaaatcctcgtagttgccgtggtcgcttattgcagactttgcctcagttgagt
cccacacccaactccaacagcagcatcagtagttgtggcagcagtggcagtaacaaagct
actggtctgaatacaagcgctggaggtggtcacttagtctcaaaccgaagcagaatggct
gcaggtacaggaaaaggatcacatgaagaagggtcatcctcgtctgtctattcatcttct
cctcttgacaaactcatgcaagatcctggcttgaacagtctaaatgcgttgacatcacag
gtagcgaatttacccaatacagtgcaacatatgcttctcactgacacattaatgtcacat
agaagggggaaagatggacaaagtcaaatgctgcaggcattacaagccattccttctact
caaccaaggagtcgaagtgtcagtgctgcctcaagcagtgggattggtggtggtgaaggt
gctagctcggaggctggaggtgatgaagattcctttctggtgtccgaaagagtatcatca
agggccaaagaggaacgcgatgagcagatttctgaggggggggaatctagaatgcggcag
atgagtggcacaagcagtggatcagaaccaactggctactatcctcctccatctcagagt
cagatatgcatcggttcaagtaaaaaccaatcccatactggaaagagtgatcagggttca
caagggaagaggatgttcacggaatcttctacaaaacaatctctgaatccatcagatgtt
tctgaaagaaagacaactgaaacccggacaccttcattgtcatctccctcctctgctcct
caatctgctgagcctggtccaagcgtacattctcgccctcctgtttcctctactccctca
tgccccattccctctcctgctcctcagttccacgcaaactgtgtttctgagcctggtgcc
actgatgtgaatactaaaaatgggcttaggaaaacaagggaaattaaatatgaaggaatt
aaagaagaaagtggagggatgattgaaaaaggcacccatggtgcagacccgagagagcag
accagagagggacacatgcgacaagatgggcaggacaaagaaaataaattggatcgatct
tccttccgtaacaaaaagggggatgagaaggacggaaaacgatgtaagacacgagatttg
gacaactccaatcaagatcaaaatattgaggaacagactaatgctggtggagtgggtgtt
attgtgtcaactcgttgtgaggtaaatcatccagaaaaagctacatgtgcacaagacaac
tgcatagaggagaaacattcagacagcttctttagagagtctagtcgtcataatggggag
gaaggaatggatttgagtctatattcctctcatcatgaagttccccagaaatctaacttt
gggcggtctgtccctcaaaatcatcccccctcaggtcctcaaaaatatggttaccaagag
tcaccacatggtgctgccatgggtttgaagaaccgagggagacctagtccagggagtgta
acaggatcaaattcaaggtatcaaggcttccatcagccaaagcccagttatgcccctgaa
cacaccaaggatgtcgcgggtactacagttgagggatcagtgaggagaagagaaggatca
ggagcaagaggacatgatgataattctcaactccagcatccatttccaagcctcttgcag
gaggttctacagggttatcacttagaccggcgctatgggcgatctgaacaggcactaact
gcccatctccaggctcaaaatatgactcggcaacagtaccaaaccaggcatccttatggc
atggctgaaagtatgagaacccaaactggagttggagaggtcacgtcccacccctcccga
atgacaagccctggaaagcctcttcaactaaatcagcgccaggggcctggatcggatttt
gtaccagaatcacctcaatcctcattgaggtctgaaggagtagatactaagggatctcac
agtgcttcttcagagaaaaataaaatggcaacaccgcagcgtcacctgagccatatgcca
cagtctacagagtttttgtctggacctccaccaaaacacatcaatttagccgactactcg
ttacctcacaggaaacccccttcaggtctgcccagctcatcatcagctgtacaggaactc
ctattgcagaaaacagagccgctagcgggcagtgttggaaccataggtcaaattgagtct
caaatgttgacgtcttcccttttacctccatctaaagagcgccgctctgtcatatgtgat
gtttgtcccaatcgccgctgtacacctgaaagagagcgggaaaaaagtccaattggtgcc
tctgtgatccaactgccatcaacaaatgatctagggaacagtaaggagttaggagataaa
aaagaggttggagtgaaggtagcatcaaaggagactgcagaggctgtccatcatagtggt
cttacaaccaaggaaactgatgttgagcatcataaaaaggctttacacccatctgtagtt
aagaatgcagagcctcttagaagatgtaagattgatttgaccaccaccatgccctctcaa
catctgcagcaaacctctcactatccctctaccaccaaccctctgtctccaccatcaaga
catcagtcatacccacatggtgtagatttatctgcagggcatgccagtggctttcctggt
tccaggtttggtgatacaagagagggcaatatgatgccacgtaacccccattttcacaat
ccctaccactcaccccaagttcatttacaaaacccacaatccgcaaacaaattacaaatg
tatactcacctccatgctcatgacttggatgacaggcttgattgggcagctaccattaat
agacccaccaaggatctgatgcagtccagtacttctccaggtagacataaactcagtcat
tcagagcagagacaaaggatgcagtctccaactgacattttgcacaatcgccaaccgttt
gctaaacagcaagttcctcatcagaacacttactatgacatgaaaatgtgggagtcaaca
cactctggtagagagagtgtggggatgttggagggggatccttaccagagaagtcaacag
ccacctcctgctgctcctcttgggtctgttgccccccaattggttccaacagctccacca
gtctccaacattcttgaatcacctgtctcccaagtggttacagaagaaatctttaaatca
ctccatccaacacctaattccatgaaaacagttggtcccagtattggtggcaatgtcaat
tccgtgatgccacagagccatcgatcaaataaaactgggggttctggggacactaatcca
ttaatgttgaggaggagagttcgttctttcatttcccctatcccagccaagaggcagcat
caggatgtatcacagcaaaggagtgcccctagttcatatcactcacctttgacctactct
gaatccagcctccaaaatgacgatgactcatccagttcagatataactacacttggttca
cctaacactccttgtcccacacctggacaaagcacttattcacaatcctcctcacctgtt
cagggtaagaagagtctgcctccaagaaaagggagaggtttgaaactggaggctattgtt
cagaaaattacaccaaatgtgaagaaatctactaacagcggccataccgatgttgactca
aatgattttgctggattttctcacactgaaatgtcacagtttactgacacacaggacgaa
gaggaatgtttaccttatctcgatgaaagtctctcattaagtgacattatgccctacaga
ggggttgatgagactggaccgttacctcccaccgcatacccctgtgatcctcaccagaca
tcacaagttcttaaacgcggcaccacaggaactgttacaagacctttgcagccagacttt
gactttgggttagggactgcagcatctagtactggtgatagagataaagagatgcccgct
gacttcaccttgttagggcccttacccccacctccaccactaccttgtccagtacagggc
tcccccccaccttcttcatctgccttgtctgatattcaacatttcactaatacttaccag
caacttgagactcgaagaggtgaacaatctgctgctaaccttctgagacaaaaacttgaa
gaaactgggattggatttgatgattacagtagcagtgactattatggaaccaccccacca
caccacagtcaggctcaagggcacttactaagacagccgcatcaaacttctccaaggtca
tctttggcaatgacagggtcaccacaagattccaaacaatcagacagttctgtacccaaa
ggctatttcccatcaggcaagaagaagggaaggcctgttggaagtgtgaataagcaaaaa
cgtgctcaagcctcccaggcccaggcacagaatgcaagcccaagtgctctgtctggccca
cccattcattctcctgcaactgttagcccacaggtagccccaagccctagcactacagcc
tctgccccatcagtcactcctccaactgatcagaaaatgactcttcctgagattccacca
gtcttgacccaagcagtaaaagtggatgctgaaagtgaggacactcagccagagccggag
gtgatatcagtctgccaggaacaagggggggtgaaagacgagagtgaggtagtgggatca
agaggcaggcagaggaggagaagaagaggagtagcagcagcggcggccaaagatgacctg
gaagcggctacaagagcaggggaacattttgataacagcagagtttttcctgataatagc
aagtgtgcctttgctccatacatacatgtggagaggaaagtagctgagataggagccgtg
tgcacaattgtgaatggtgaagaggaaaagatgaagggagagcgtggagcggttggaggg
aaagcaagcagtagtggtattgaagctcttttgacctcagctcttttgtctcaactgcct
aggagagacggagaaattgagagggtcaaagagaagagggaactggatgtagactctgcc
ctccaggcaggaaaggttctaccttcatctgagtaccttctaccaggccctgtgattact
gaatccattcattctggccgtcttctctgctgcctgtgccagaaatgggccaattacaaa
aaccttggggatctctatggaccttactaccctcctgaatatgctacgaggcttcccaag
aatcaaccccagattcgacagagtcttgtaactactgggatgagtagaaatgtgcaaaat
ctcgacaccatttcaaatgtgttgaccacccagggccctgaactgcaagatgtgccaatt
atcaaatcctcaacttatagtgattgcatgttcaatcaagagacaaatacaacttcccct
gccactgctgttggcactgcctctccagcaggtggaggggagatgctttatctggccagc
aaacttgctaaaaccaccaccaacaagacaacagttcttaattgggacatgcctccagag
ttaaaaccaattactgagctaaggaaacaacctgaacttcagaatgagcccacttacagt
cagcaaaaccaaccatgccagcaacagcagacagaagacactcaacaaaggccacaacac
agaaagctgacgtcgcacccgagatttaaaaggagacagaaatccagtgagaattcccca
agaatggtgccatccaacagcaaagcctcattgccattccagccccctcccccaacctta
gactcccttgggcctttggcacagctggcccaacttcctcagatgcctatggacccagag
gagctgtgggtgcatgaggcatgcatggtctggaccagtggggtttacctggtcaatgga
agactgtatggcctacaggaggcactagatggtgccagagacacagtctgttcatattgt
gaaatggttggctcaaccctcggctgttacagcaaaggctgcacactgagatatcactac
ccgtgtgccatggatgcagactgctctctgaatgaagataacttttcactacgatgtccg
aagcacaaggtaaaaaaggagagtttccccagagcagccagccagctaaatctgtgtacc
ttgagcagtctgagagaggctgagagagacactgaggaggaggagacgcaggagtatagg
atcggtatgtttggacgatga
DBGET
integrated database retrieval system
