Oncorhynchus nerka (sockeye salmon): 115104299
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Entry
115104299 CDS
T07952
Name
(RefSeq) alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like isoform X1
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00510
N-Glycan biosynthesis
one00515
Mannose type O-glycan biosynthesis
one01100
Metabolic pathways
Module
one_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115104299
00515 Mannose type O-glycan biosynthesis
115104299
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115104299
Glycosyltransferases [BR:
one01003
]
Glycan extension
Wide specificity
115104299
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_18
Motif
Other DBs
NCBI-GeneID:
115104299
NCBI-ProteinID:
XP_029481542
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All DBs
Position
LG21:25868815..25948436
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AA seq
794 aa
AA seq
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MSAVNTDYSTMVRRCLLTFKPFRIFVAGIGFFSLCFLMTSLGGQFSAKRPGDTPFTMRAE
VLGGPESRGVLRKISDMLEVIMKRMDTLSKLGNTTTDSHRLDELSSALDRIQPIGLVERI
QAIAQNMSDMAVRVEQILQRSMATNRVKDGATGQCEVPKDPHYPDCPSKVDWMRARWTSD
PCYAFYGVDGSDCSFLIYLSEVEWFCPPLTWRNQTTTPTHKPFPKRQAAFRSDIGALLEQ
VGTGKESLSFMKRRMRRLAAQWASAARRLDDRLRSQWREQKRILVHVGFLTEESGDVFSP
KVLKGGPLGEMVQWADILTALHVLGHNLKISVSLKELQGFLGVPPGRGSCPLTGPLPFDL
IYTDYHGLQQMRQHMGLSLRKHKCHIRVIDTFGTEPAYNHEDYATLHGYRTNWGYWNLNC
RQYMTMFPHTPDNSFMGFVAEELNGTERLSIQRNKVDSMAVVYGKEASMWKLQGKERFLA
ILHRYMDIHGTVYYETQRPPEVPAFVKNHGLLPQQELQHLLRKAKLFIGFGFPYEGPAPL
EAIANGCIFLQPKFKPSHSSLNHEFFRGKPTSRQVSSQHPYAEQYIGRPHVITVDFNNSQ
EFESAIRDIMKTKVEPYLPYEYTCEGMLERVHAYIQNQEFCAPEAPFPSANTSSSWPGSP
PSPFVLLPNSSALAWASNISTPPSWPPLSALTLLVSLEGQSCIDACQSAGLICEPAFYRF
INIKEAFSGLEVQCDGVEAEINHIFPAFSVESSECGLQKDPLLFSCAGANTKYHRLCPCR
DYRKGQVALCRDCL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgtgaacacagactattcaactatggtgagaagatgtcttttgacgttcaaa
ccattcaggatctttgtggcggggatcggcttcttcagcctgtgcttcctaatgacctcc
ctgggggggcagttctcggccaagcgacccggagacactccattcaccatgcgggccgaa
gtgctgggaggtccagagtctcgcggggtgctgaggaagatcagtgatatgctggaggtc
atcatgaagaggatggacactttgtccaaactgggcaacaccaccacagactcccataga
ctagatgaactcagctcagcactggacaggatccagccgattggtctggtggagaggatc
caggctatcgcccagaacatgtctgacatggctgtgagggtggagcagatcctacagcgc
agcatggccaccaacagagttaaggatggtgcaacaggacagtgtgaggtgcccaaagac
cctcactacccagactgccccagcaaggtggattggatgcgtgcccgctggacctcagac
ccctgctatgccttctatggggtggacggctccgactgctccttcctcatctacctgagt
gaggtggagtggttctgcccccctctgacctggaggaaccagactaccacacccacgcac
aaacctttccccaagagacaggcggcattccggtcagacatcggggccctcctggagcag
gtgggtacggggaaggagtctctgagtttcatgaagagaaggatgcgcaggctggctgca
cagtgggcctcggctgcacgcaggctagatgaccgtctgaggagtcaatggagggagcag
aagaggatcctggtgcacgtaggcttcctgacagaggagtcaggggacgtgttcagcccc
aaggtcctgaagggaggtcctctgggggagatggtccagtgggccgacatcctcacagcc
ctgcacgtcctgggacacaacctcaagatctctgtctcgctcaaggagctgcaggggttt
cttggggtcccccctggaagaggaagctgccccctgacaggacctctgccctttgacctc
atctacacggactaccatggcctgcagcagatgaggcagcacatgggtctctctctgagg
aagcacaagtgccacatccgtgtgattgacacatttggcacagagccggcatacaaccat
gaggactacgccaccctgcacggctacaggaccaactggggctactggaatctcaactgc
aggcagtacatgaccatgttcccacacactccagacaactccttcatgggttttgtggct
gaggagctgaacggcacagagaggctgagcatccagaggaacaaggtggacagcatggca
gtggtgtacggcaaagaggccagcatgtggaagctccaaggtaaggaaaggttcctggcc
attctgcaccgctacatggatatccatggcactgtctattatgagacacagcgccctcca
gaggtgcctgcttttgtcaaaaaccacggcctgctgccccagcaagagctgcaacatctg
ctcagaaaggccaagctcttcattgggtttggcttcccatacgaagggccagccccttta
gaggccatagccaacggctgcatcttcctgcagcccaagtttaagccgtcccacagttcc
ctcaaccatgagttcttcagagggaagcccacttccagacaggtctcctcacagcatccc
tatgctgagcagtatataggcaggccacatgtcatcacggtggatttcaacaactcccaa
gagtttgagtctgccatacgggacatcatgaagaccaaggtggagccatatctgccctat
gagtacacctgtgaggggatgctggagagagtgcatgcttacatccagaaccaggaattc
tgtgcacccgaagctccatttccctcagcgaatacctccagcagttggccaggcagcccc
cccagcccctttgtcctgctgcccaactctagtgctctggcctgggcctccaacatcagc
actcccccctcttggcccccgcttagcgccctgacgctgctggtctccctggagggccag
tcatgtatagatgcgtgccagagcgcaggcctgatctgtgagcccgccttctaccgcttc
atcaatatcaaagaggccttcagcgggctggaggtgcagtgtgatggggtggaggctgag
atcaaccacatcttcccagccttctcagtggagagtagtgagtgtggcctccagaaagac
cctctgctgttcagctgtgccggggccaacaccaagtaccaccgcctctgtccctgtagg
gactaccgtaagggccaggtggcactgtgcagggactgcttatga
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