Oncorhynchus nerka (sockeye salmon): 115104335
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Entry
115104335 CDS
T07952
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115104335
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
115104335
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
115104335
NCBI-ProteinID:
XP_029481614
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Position
LG21:27293370..27299200
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AA seq
614 aa
AA seq
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MEIEGRDFMNSPPLKTVRFGGNVVATLAKFKQGDTSDYELLKHQLADPDIKDAQIINWLQ
EFRNCVTQLSKDHEQLIYVALRLPWLGRSPAVVEEYLSFLGNLVSAQTVYLRACLKMVVS
NFKPKRVKICEGGVDISDSDDDDENLPRSFDQCHQALQLIGRYVPSTSCFLMPILIDNFP
FVQKSSRTLECYVHNLLRVAVYIPSLRRDILELIISRMLKLDVSAPRGEIEEVEENAVQQ
ELKGEQEEEGLFDMDEDVCSVKSSPAGTNVMVHPVAERLDTLMVVLLAFIKDMCHVNSCL
DVERTKDLYKDLVCVFDKLILPTHASCHVQYALFYLCSFRLALAEAFLEHLWRLLQSPSH
PAVLRQSAAGYMGSFLARANFLPVATVHACLDLLVPWLHLYIDSQDSGSRAYCDIMLHGP
FYNACQAVFYTLIFRHRSILEGNMKKGLAYLQSLNLERIVMCQLNPLKVCLPAVTNMFAA
ITRKYQLVFCYTIIERNNRHVLPVVRSSVGGDCVSTNTNPLDSFFPFDPYVLKRSSKLIE
PLYQVWEEPADTEVDTVTTKRVRPCSDADEDDFLRGETPETKGVMGMTPGSYESHLHSPS
SVGSPPISFLQRPF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaggggagagatttcatgaacagtccccccttgaaaacggtgcggtttggg
ggcaatgttgttgccacgttagcgaaattcaaacagggagacaccagtgactatgagttg
ttgaaacatcagctggcagatccagatatcaaggatgcccagatcatcaactggctgcag
gagttccggaattgtgtgacacaactcagcaaagaccatgagcagctgatctatgtggct
ctgaggctgccgtggctgggccgaagccctgccgtagtggaggagtatctgtctttcctc
ggtaacctggtatctgcccagacggtctacctccgggcctgcctcaagatggtggtctcc
aacttcaaacccaagagagtgaagatctgtgagggaggagtggacatctctgactcggat
gatgacgatgaaaaccttccaagaagttttgaccagtgtcaccaggccctgcagctgatt
ggcagatatgtcccatccaccagctgtttcctgatgcccattctgattgacaactttcct
tttgtgcagaaatcttccagaaccctggagtgttatgtccataaccttctgcgggtggcg
gtgtacatcccctctctacgacgagacatcctggaactcatcatcagtaggatgctcaaa
ctggacgtgagtgctccccggggagagatagaggaggtggaggagaatgctgtgcagcag
gagttgaaaggagagcaggaggaggagggcctctttgacatggatgaggatgtgtgttca
gtgaagtccagtccagcagggaccaatgtgatggtccaccctgtcgctgagagactggac
actctcatggttgtgctgctggccttcatcaaggacatgtgccatgtcaacagttgtctg
gatgtggagcggactaaggatctgtacaaggacctggtgtgtgtgtttgataaacttatc
ctacctacacacgcctcctgtcacgtccaatacgccctcttctacctctgcagcttcaga
ctggctctggcagaggcgtttctggaacacctgtggaggttactgcagagcccgtctcac
ccggcagtactgcgccaatctgccgctggctacatgggtagcttcctggcccgtgccaac
ttcttgcccgtcgctacggtacatgcgtgtctggacctgctggtcccctggctccaccta
tacatagacagccaggactccggctcccgggcctactgtgacatcatgctacacgggccc
ttctacaacgcctgccaggctgtcttctacacactcatcttcagacacaggagcatcctg
gagggtaacatgaagaaagggctggcgtacctgcagagtctgaacctagagaggatagtg
atgtgtcagctcaaccctctgaaggtctgcctgcctgccgtcaccaacatgtttgctgcc
atcaccagaaagtaccagttggtgttctgctacaccatcatcgagaggaacaaccgccat
gttctccccgtggtccgcagctccgtggggggtgactgtgtgtccaccaacaccaacccc
ctggacagtttcttcccctttgacccctacgtgctcaagaggtcaagtaaactcatcgag
cccctctaccaggtgtgggaggagccagcagacactgaggtggacacagtcaccaccaag
agagtcagaccgtgctcggatgcagatgaggatgacttcctgcgaggggagacgccggag
acaaagggggtgatgggtatgacccctggctcgtatgagtcacacctccacagccccagc
agtgtgggctcgccgcccatctccttcctacagagacccttctga
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