Oncorhynchus nerka (sockeye salmon): 115104345
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Entry
115104345 CDS
T07952
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115104345
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115104345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-B_box
zf-RING_5
zf-RING_2
zf-Nse
zf-RING_6
zf-ANAPC11
zf-RING_10
PAP_NTPase
Met_synt_B12
DUF6809
Motif
Other DBs
NCBI-GeneID:
115104345
NCBI-ProteinID:
XP_029481630
EnsemblRapid:
ENSONEG00000005814
LinkDB
All DBs
Position
LG21:27382175..27385934
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AA seq
520 aa
AA seq
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MALRPRASSQPGKPSFLQSPKVVMALRPRAVSSHSGSMLEDELTCSVCCEIFRDPVVLKC
THSFCRACLQQFWNQKKARRECPVCRRKCSLTEPTVSLALKNVADTFFREQRSQGEAGGG
PDRGGVPVKSEAKCHTHGEVLKLFCQDDAEVLCCVCHTSKRHQGHCVIPLEEGAQELKEE
IKKELILMKKSLRGLYEAKQECDDTTVHIKSQTQQTENHIREEFEQLRQFLQNEEEARIA
ILQEEDEQKRHLVRKKTEGITADILTLSHAIIAIDNDIASSDALFLQNYRNTKKRAVIPQ
KGPEEISGAMINVAKHVSSLKYKVWEKMVGLVEYTPVTLDPNTAYSWLSLNKDLTSVTNS
GHVQVLPDNPERFDHFVFVLGSEGFTTGCHAWEVEVGDKDDWMLGVVKESINRKGRISGC
PEGGLWMISHCEGEYMAVTRPRTPLKLTGELKRVRVQLDYESGEVTFSNPVNMMSIYTFN
DFFTERMFPFFCPGANINGNNPGPLKICPVKVAVWNSATW
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgcccacgggcttcctcccagcctgggaaaccttcgttcttacagagcccc
aaggtggtcatggctctgcggcccagggccgtgtcctctcactcgggctccatgctggag
gatgagctaacctgctctgtgtgctgcgagatcttcagggaccctgtggtgctcaagtgc
acccacagcttttgccgggcctgcctgcagcagttctggaaccagaagaaggcgaggcgc
gagtgtcccgtgtgccgcaggaagtgttccctgacggagcccacagtgagcctggctctg
aagaacgtggccgataccttcttcagggagcagaggagccagggcgaggcgggtgggggg
ccagacagagggggcgtcccagtgaagtctgaggcgaagtgccacacacacggggaggtg
ctgaagctgttctgccaggacgatgccgaggttctctgctgtgtgtgtcacacgtccaag
aggcaccagggccactgtgtgatcccactggaggagggggcacaggagctcaaggaagaa
ataaagaaagaattgatccttatgaagaagagcctccgtggcctctatgaagcaaagcag
gagtgtgatgacacaactgtgcacatcaagagccagacccagcagacagagaatcacatc
agagaggagtttgagcagctcaggcagttccttcagaatgaggaggaagccaggatagct
attctacaggaggaagatgagcagaagagacatctggtgaggaagaagacagagggcatc
acggcagacatcctcaccctctctcatgccatcatcgctattgataatgacatagcctcc
agtgatgctcttttcctccagaactacagaaacacaaagaagagagctgtgatacctcag
aagggtccagaggagatctccggtgctatgatcaacgtggcgaagcatgtcagctccctc
aagtacaaggtctgggagaagatggtggggctggtggagtacactcctgtgactctggat
cctaacacggcctactcctggctctctctgaacaaggacctgaccagtgtgaccaacagt
ggtcatgtgcaggtgctcccagacaacccagagcgttttgaccacttcgtgttcgtcctg
ggctctgagggcttcaccaccggttgccacgcctgggaggtagaggtgggggacaaggac
gactggatgctgggtgtggtcaaggagtccattaacaggaagggccggatctcaggctgc
cctgagggcggcttgtggatgatctcccactgcgagggtgagtatatggccgtgacccgg
ccacgcacccctctcaaactgacaggggagctgaagagggtcagggtgcagctggactac
gagtctggggaggtgaccttctccaaccctgttaatatgatgtccatctacaccttcaat
gatttcttcactgagaggatgttccccttcttctgccctggagccaacatcaacggcaac
aaccccggcccgctgaagatctgcccggtcaaagtggctgtgtggaacagcgccacctgg
tga
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