Oncorhynchus nerka (sockeye salmon): 115104357
Help
Entry
115104357 CDS
T07952
Name
(RefSeq) long-chain fatty acid transport protein 1-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03320
PPAR signaling pathway
one04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115104357
09158 Development and regeneration
04382 Cornified envelope formation
115104357
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115104357
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115104357
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115104357
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
115104357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115104357
NCBI-ProteinID:
XP_029481657
LinkDB
All DBs
Position
LG21:27903383..27919598
Genome browser
AA seq
648 aa
AA seq
DB search
MRNAASASLSLGSLGLLRLFGVPWSWSLAAGFGVFLGTGGWKYLYIVVRTAKRDLNGLYV
LLRVKIALWHHLRRNSNIPSIFAQTVKQHPNKPALIYDATAETWTFTQLDLLSNAVAQWA
LAQGWAPGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDALLHCVGVSVSRGIV
FGAELAGAMLEVSSSLSPSMVRFCTGELSVDCLASLSAQNLDYILASAPTLPPPPCIPPK
SFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHAFRMRQDDIIYDCLPLYHSAGNI
MGVGQCLINGLTVVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSEKGHRV
RLAVGNGLRPSVWEAFTERFGVAQVGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLMKVNEETTALVRDRHGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIAN
NVFKKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGTLSGLLGQADVA
VYGVSVPDVEGKAGMAAIADPTGTFDCDVFLREVQQALPPYARPVFLRISPQVDTTGTFK
IQKTRLQREGYDPRLSTDQIYFLNSRAGRYEAVNEELHSAIVEGRMAL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcagcgagtgcctctttgtctctgggatcgctgggtctgctgcgtctcttc
ggggtcccctggtcctggagcttagcagcaggcttcggggtctttctgggcacaggtggt
tggaagtacctctacatcgtagtccgtactgccaaaagagacctaaatggcctttacgtg
ttgttacgagtcaagatagccttgtggcaccacctacggcgcaacagcaatatcccctcc
atctttgcccagacggtgaagcagcacccaaataaacccgccctcatctacgatgccaca
gcagagacgtggaccttcacccagctggacctgctgtctaacgctgtggcccaatgggct
ctggcccagggctgggccccgggggatgtggtagccctcttcatggagagccggcccttg
caggtggccctctggctgggcctggccaaggtgggagtggaggcagcactcatcaacttc
aacctgcggagggacgctctcctgcattgtgttggagtgtctgtgtccagagggattgtg
ttcggagccgagctggctggtgccatgttggaggtgagctcatccctgagcccgtcgatg
gtgcggttttgtacaggagagctcagtgtagactgtctggcctccctgtctgcccagaat
ctggactatatcctggcctctgcccctacactgccccctcctccctgcatcccacccaag
agcttcaatgatcgtctgttctatatatacacctcaggcaccacaggactccctaaagct
gccatagtggtgcacagtcggtattaccgtatcgctgcttttggctaccatgctttccgc
atgcgccaggatgacatcatctacgactgccttcccctctaccactctgcaggtaatatc
atgggtgtaggccagtgtctcatcaatggactcactgtggtggtgaagaagaaattctca
gccagtcgcttctgggaagattgcatcaagcacaactgcactgtggtgcagtacataggg
gagatctgtcgctacctgctgtcccagccggtgcggccttctgagaagggtcaccgggtt
cgcctggcggtggggaatgggctgcgtcctagtgtctgggaggccttcaccgagcgcttt
ggtgtggcccaggtaggggagttctatggagccaccgaatgcaactgcagcatcgccaac
atggacggcaaggtgggagcttgtgggttcaacagccgcatcctgcccaatgtgtaccca
atccgcctcatgaaagtgaatgaggagaccacggcgctggtgagggacaggcacggcctg
tgtgtgccctgccgtcctggggagccagggctgctggtgggaaggatcaaccaacaggat
ccgctacggaggtttgatggctacgccaaccaggatgccaccaggaagaagatcgccaac
aatgtcttcaagaaaaatgactcggcatatctgtcaggggatgtgttggtgatggatgag
ctaggctacatgtacttccgggaccgcagtggagacacgttccgctggagaggagagaac
gtctccaccaccgaggtggagggaacactgagtggtctgctgggccaggccgatgtggct
gtgtatggggtatctgtaccagatgtggaagggaaggcagggatggctgccatcgcagac
ccaacagggacatttgactgtgatgtgttcctgcgagaggtccaacaggccctgccccct
tacgcccgtcccgtgttcctacgcatctccccacaagtagacaccacaggtacctttaaa
atccagaagacccggttgcagagggagggatacgatccgcgcttatcaaccgaccagatt
tactttttgaactccagagcagggcgttatgaggctgtgaatgaggagctacacagtgct
atagtggagggtagaatggctctatga
DBGET
integrated database retrieval system
