Oncorhynchus nerka (sockeye salmon): 115104411
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Entry
115104411 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: regulatory-associated protein of mTOR-like
KO
K07204
regulatory associated protein of mTOR
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04136
Autophagy - other
one04140
Autophagy - animal
one04150
mTOR signaling pathway
one04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115104411
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115104411
04136 Autophagy - other
115104411
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
115104411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115104411
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
115104411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
Beta-prop_EML_2
HEAT
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
HEAT_2
WD40
WDR55
Cnd1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
EIF3I
WD40_2
WD40_RFWD3
PDS5
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
115104411
NCBI-ProteinID:
XP_029481695
LinkDB
All DBs
Position
LG21:complement(5736122..5945918)
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AA seq
1318 aa
AA seq
DB search
MKMDSELLLSPAIFLAEEEEADMSDWNLPLAFMKKRHSEKIEGSKALAQSWRMKDRMKTV
SVALVLCLNVGVDPPDVVKTSPCARLECWIDPLSMSPQKALETIGANLQKQYENWQPRAR
YKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEIWVFNKNYTQYIPLS
VYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMK
NCIQLAACEASELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVPGVTLDLIEKI
PGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR
SYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQV
WLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLK
LLQSSARELRPLLVFIWAKILAVDSVSGNTHIHTYIHTYTLAHIYTCIPQTLTVHHYNTP
QEACLQGNLIAICLEQLSDPHPLLRQWVAVCLGRIWQNFDSARWCGVRDSAHEKLYSLLS
DPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLINDGSPVVRKELVVALSH
LVVQYESNFCTVALQFMEEEKNYAVPSTANTLEPGNLTPVRDSPAIPRLRSVNSYTNIRA
ATTARNLNKSLQNLNLNEEGGPVVFSPGNLSTSSSASSTLGSPDNDEYILSFETIDKMRR
VSSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPFPEVSDLAMKVLNSIAYKATMNARPQR
ILDSGSLTQSAPASPTSKGAHIHQAGGSPPMPSASSSSLTNEVPKPPTRGGEQPPTRPPY
TPTLGGQAPHSHQFPRTRKMFDKGPSGSEQAGDDADDPGGHKAYMNANLSTGLCDWSAKY
FAQPVMKIPEEHDVESQVRKEREWRFLRNARVRKQSQRITQRGVTRLDDQIFINRNPGVP
SVVKFHPFNPCIAVADKDSICSRSPSFLSPTILSLSLTLFFSFSPPTPPPPLDDGALRIW
KNFADQRNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMTSGDVRVIRIWDTEREMK
VQDIPTGADSCVTSLSCDSQRSLIAAGLGDGSVRLYDRRMGANECRVMTYREHSSWVVKA
HLQKQTDGKVISVSVDGDVRFFELRSPDSVNVLQTVKGLTALDIHPQANLFACGSMNQFI
AVYNSNGDVISNIKYYDGFMGQRIGAISCLAFHPYWPHLAVGSNDYYMSIYSAEKRLR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggactcggaactgctgctctcgccggccatattcttggctgaggaggaagag
gcggacatgagcgactggaacctgccgctggccttcatgaagaaacgccactcagagaag
atcgagggctccaaggccctggcccagagctggaggatgaaggacaggatgaagacagtg
agtgtggccctggtgttgtgtctcaacgtgggcgtggaccctcctgacgtggtcaagacg
tcaccctgcgccagactggagtgctggatcgaccctctgtccatgagtccacagaaagcc
ctggagaccatcggggccaacctgcagaagcagtatgagaactggcaacccagggcacgt
tacaagcagagtctggaccccacagtagacgaggtgaagaagctgtgtacgtccctgaga
cgcaacgccaaggaggagcgtgtcctcttccactacaatggacacggggtcccccgaccc
accgtcaacggggagatctgggtcttcaacaagaactacacccagtacatccctctgtct
gtgtacgacctccagacgtggatgggcagcccctccatcttcgtctacgactgctccaac
gcaggcatcatcgtcaagtctttcaaacagttcgccctgcagagagagcaggagctggag
gtggcagccattaaccccaaccaccccctggcccagatgcctctgcccccctccatgaag
aactgtatccagctggctgcctgcgaggcctcagagctactgcccatgaaccctgacctc
cccgctgacctcttcacctcttgcctcaccacgcccatcaagatcgccctgcgctggttt
tgcatgcagaaaagtgccaagctggtgccaggagtgacgttggacctcattgagaagata
cctgggagattgaatgacagacgcacccctctgggagagctcaactggatcttcactgct
atcactgacactatcgcctggaacgtgctgcccagagatctcttccagaagctctttcgt
caggacctgttagtggccagtttattccgcaacttcctgttggccgagaggataatgagg
tcatacaactgcacccctgtcagcagtccgcgcctgccacctacgtacatgcacgccatg
tggcaggcatgggacctggctgtggacatctgtctctctcagctgcccaccatcattgag
gagggcaccgccttcaggcacagtccgttctttgcagagcagctgacagcgttccaggtg
tggctgaccatgggagtggagaacaggaacccccccgaacagctacccatcgtactgcag
gtcctcttgagtcaggttcacaggctaagagcgctggacctgctcggccgcttcctggac
ctggggccctgggccgtcagtctggccctctcagtagggatcttcccctacgtgttgaag
ctgctacagagctctgcgcgggagctccgacccctgctggtcttcatctgggctaagatc
ctggctgtggacagcgtgagtggtaacacacacatacatacatacatacacacatacaca
ctagcacatatctacacatgcatcccacaaacactcactgtgcaccattacaataccccc
caggaggcctgtctgcaggggaacctgatagccatctgcctggagcagctctctgaccct
catcccctgctccgtcagtgggtggccgtctgcctgggacgcatctggcagaactttgac
tcggcccgctggtgtggtgtcagggacagtgcccacgagaagctctacagcctgctgtcc
gaccccatacctgaggtgcgctgtgcggcggtgtttgccctggggacgtttgtggggaac
tcagccgagcgaacggaccactctacgaccatcgaccacaacgtggccatgatgctggca
cagctcatcaacgacggcagccctgtggtccgcaaggagctggtggtggctctgagtcac
cttgtggttcagtacgagagtaacttctgcaccgtggccctgcagttcatggaggaggag
aagaactacgctgtaccctcaactgccaacaccttagagcccggtaacctgactccagtg
cgcgacagccccgccatccctcggctgcgttctgtcaactcctacaccaacatccgagct
gccaccaccgcacgcaacctcaacaagagcctgcagaacctcaacctcaacgaggagggt
ggtccggtggtgttctctccaggtaacctgagcaccagcagcagtgccagcagcaccctg
ggtagccctgacaacgacgagtacatcctctcctttgagaccatcgacaagatgagacga
gtctcctcctactcctccctcaactccctcataggggtgtcgttcaacagcgtttacaca
cagatctggagggttctcctgcacctggcggccgacccgttcccagaggtgtccgacctg
gccatgaaggtcctcaacagcatcgcctacaaggccactatgaacgctcggccccagagg
atcctggactctggctctctcacccagtcggcccccgccagccccaccagcaagggggca
cacatccaccaggcaggtggttctccccccatgcccagtgccagcagctccagtctgacc
aacgaggtgcccaaacccccaacacgtggtggagaacagccccccacgcgacccccctac
acccccacgctgggcggacaggccccccactcccaccagttcccccgcacgcgcaagatg
ttcgacaaggggccctccggctctgaacaggccggggatgatgcagatgacccaggaggt
cacaaggcctacatgaatgccaacctgtctacagggctgtgtgactggagcgccaagtac
tttgctcagcctgttatgaagattccagaggagcatgatgtggagagtcaggtgaggaaa
gagagggagtggaggttcctgaggaacgcccgcgttcgaaaacagagccaacgcatcacg
cagagaggcgtgacgcgtctggacgaccagatcttcatcaaccgtaaccctggcgttccc
tccgtggtcaagttccaccccttcaacccctgcatcgccgtggcagacaaagacagcatc
tgttctcggtcaccctccttcctttctccaaccatcctctctctttctctcactcttttt
ttctctttttctccccccacccctcctcctcctctagatgacggggcgttgcgtatctgg
aagaattttgcggaccagcggaaccccgagatggtgacggcgtggcagggcctgtccgac
atgctccccaccacccgaggtgcaggcatggtggtggactgggagcaggagacggggctg
ctgatgacttctggagacgtgagggtcatcaggatctgggacacggagagggagatgaag
gtccaggacatcccaacgggggcagacagctgtgtgaccagcctatcatgtgactcacag
cggtccctcatcgcagcggggctgggcgacggctcggtccgcctctatgacaggaggatg
ggcgccaacgagtgtcgtgtgatgacgtaccgggaacactcgtcctgggtggtcaaggcc
cacctgcagaagcagacggacggcaaagtcattagtgtcagtgtcgatggagacgtgcgg
ttcttcgagctgcggtcgccggactctgtgaacgtgctgcagacggtgaaggggttaacg
gcgctggacatccatccgcaggccaacctgttcgcctgtggatcgatgaaccagttcata
gccgtgtacaactccaacggtgacgtgatcagcaacatcaagtattatgacggtttcatg
ggccaaaggatcggggccatcagctgtttggccttccatccctactggccccacctggcg
gtgggcagcaacgactactacatgtccatctactcagcggagaagaggctcagataa
DBGET
integrated database retrieval system
