Oncorhynchus nerka (sockeye salmon): 115104478
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Entry
115104478 CDS
T07952
Name
(RefSeq) DNA-binding protein SATB1-like isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115104478
03036 Chromosome and associated proteins [BR:
one03036
]
115104478
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
115104478
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115104478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115104478
NCBI-ProteinID:
XP_029481710
LinkDB
All DBs
Position
LG3:complement(11382326..11439818)
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AA seq
903 aa
AA seq
DB search
MMDHLSEACLGKENCDLVNSMGDRDSKAPPAKLARLEQNGSPLGRARLGSTGAKLAGVPY
KPSGHLLKNCHKRGNMLPVFCVVEHYESPIEFDSKEEHAEFVLVRKDMLFNQLIEMALLS
LGYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLE
DLPPEQWTHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFG
RWYKHFKKTKDMMGMRQPSQLEGYLGTCVLHDSPRANTLADMDGLSDHSPPGLNHNHNHL
TFSQQPIPGNTAEQPPSSPVPPLPPPSHGGGQNPGRPAQLPPGLHHPGLVSTPISPQLVN
QQLVMAQILNQQYAVNRLLAQQSLSQQYLNHPPVNRNALTKPLEPQVASNTEVSMEIYQW
VRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEA
ERDRIYQDERERSLTAASAMGPAPLISTPPTRPVQVWNEQPRREDCNNIRPEDWNPRIPV
GISPIPESRKPGSITLFSNPFADTPYPAQVKASPLPSEWNGKTESCILNINSSIYDEIQQ
EMKRAKVSQALFAKVAASKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLAQAERD
AIYEQESTAGQQQHHADRPPHMMHMSTDPMQNPNLMYMSHTDPLQSQTHQPPQQQQQHQP
PMSLQHPSQPPLSQQPMQQQQQQPPMGPRLPPRQPSTASPAETEDQARGGGGTKARSGGG
KISQEALGILQSFIQDVGMYPDEEAIHTLSAQLDLPKLTIIKFFQNQRFYVNHPAKLPKE
PNNSSSSSPAFEEELSDFREGSAELLKELEESTQTNSTIFSIKIEEHLARSEALSESDHE
TKE
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccatctcagcgaggcgtgcctggggaaggagaactgtgacctggtcaacagc
atgggcgaccgcgactccaaggcccccccagccaagctggcccggctggaacagaacggc
agccccctgggcagggcccgcctgggcagcacgggggccaagctggccggggtaccctac
aaaccctcgggacacctcctcaagaactgccacaagaggggcaacatgctccctgtgttc
tgcgtggtggagcattacgagagccccatcgagtttgacagcaaggaggagcacgccgag
tttgtgctggtcaggaaagacatgctgttcaaccagctcatcgagatggcccttctgtca
ctgggctactcgcacagctcggcggcacaggcgaaaggtctcattcaggtgggcaagtgg
aacccggtcccactgtcctacgtgacggacgcgccggacgccaccgtggcagacatgctg
caggacgtgtaccatgtggtcacgctgaaaattcagctgcacagttgtcctaaactggag
gacctgccgccagagcagtggacccactctacagtaagaaatgccctcaaggagttactc
aaagacatgaaccagagctctctggcaaaagaatgtcccttatcacagagtatgatctcc
tccattgtgaacagcacttactatgcaaatgtgtcggcggcgaagtgtcaggaatttggg
cgctggtataaacatttcaagaagacaaaagatatgatgggcatgcgccaaccctcgcag
ctggagggctacctggggacgtgtgtcctccacgacagcccgcgtgccaacacactagca
gacatggatggcctgtccgatcactctcctccgggcctcaaccacaaccacaaccatctg
accttctcccaacagcccatcccgggcaacacggccgagcagcccccctcctccccggtt
ccacccctgccccctccgtcccatggtgggggccagaaccccggccgcccagctcagctc
ccccccggcctgcaccacccgggcctggtgtccacccccattagcccccagctggtgaac
cagcagctggtcatggcccagattctcaaccagcagtatgccgtcaaccggctcctggca
cagcagtcgctgtcgcagcagtatctcaaccacccgccggtcaaccgaaatgccctgacc
aagcccctggagccccaggtagccagcaacactgaggtgtccatggagatataccagtgg
gtgagggatgagctgaagagggccggcatctcccaagccgtgttcgcccgcgtggctttc
aacaggacccagggcctgctgtctgagatcctgcgtaaagaggaggatcctaagacggcc
agccagtctctgctggtcaacctgcgggccatgcagaacttcctgcagctgcccgaggcc
gagcgagaccgtatttaccaggacgagagggaaaggagcctaacggctgcctcagccatg
ggacctgcgccactcatcagcaccccgcccacccggccagtgcaggtatggaacgaacag
cccaggagagaagactgtaacaacatcagacctgaggactggaaccccagaatccctgtg
ggcatctctcctatccccgaatccagaaaacccggcagcatcaccttgttttccaaccct
tttgctgacactccttaccctgcccaggtgaaggcctctccgctccccagcgagtggaac
ggcaagacggagagctgcatcctcaacatcaactcctccatctatgacgagatccagcag
gagatgaagagggccaaggtttcccaggctctgtttgccaaggtggccgcctccaagagt
cagggctggctgtgtgagcttctgcgttggaaggaggaccccagcccagagaaccgtacg
ctgtgggagaacctgtccatgattcgccgcttcttgagcttggcccaggcggagcgtgac
gccatctacgaacaggagagcacggccggccagcagcagcaccacgccgaccgacccccg
cacatgatgcacatgtccactgaccccatgcagaacccaaatctgatgtatatgtcccac
acagatccactacagtctcagacccatcaaccgccccagcaacagcagcagcaccagccc
cccatgtccctccagcacccttcccagcctccactgtcccagcagcccatgcaacagcag
cagcagcaaccacccatgggcccccggcttccccctcgccagccctccaccgcctccccg
gcagagacagaggaccaggcccgcggcggcgggggcaccaaggctcggtccggcgggggc
aagatctcccaagaggccctaggcattctgcaaagcttcatccaggacgtggggatgtac
ccagacgaggaggcaatccacaccctgtcggcccagctggacctgcccaagctcaccatc
atcaagttcttccagaaccagcgcttctacgtcaaccacccggccaagctgcccaaggaa
cccaacaacagcagtagcagcagcccggccttcgaggaggagctgtcggacttcagggag
ggcagtgccgagctgctgaaggagctggaagagagcacacagaccaacagcaccatcttc
tccatcaagatcgaggagcacctggcccgctccgaggccctttcagaatctgaccacgag
accaaggagtag
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