Oncorhynchus nerka (sockeye salmon): 115104530 Help Entry 115104530         CDS       T07952                                  Name (RefSeq) oxygen-regulated protein 1-like   KO K19538   retinitis pigmentosa 1 Organism one  Oncorhynchus nerka (sockeye salmon) Brite KEGG Orthology (KO) [BR:one00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:one03037]     115104530    04812 Cytoskeleton proteins [BR:one04812]     115104530 Cilium and associated proteins [BR:one03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    115104530 Cytoskeleton proteins [BR:one04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulin-binding proteins     Microtubule-associated proteins (MAPs)      115104530 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DCX Motif Other DBs NCBI-GeneID:  115104530 NCBI-ProteinID:  XP_029481751 LinkDB All DBs Position LG22:26253637..26263175 Genome browser AA seq 2594 aa AA seqDB search MSDAQDQFSGSGHTVTTSRHPYITDPIASKRICFYKSGDPQFSGLRMVINNRTFKTFDAL LDSLSKKVPLPFGVRNITTPRGVHAVHTLDELEDGKAYICSDQRKVKPINMAVANKKLPP WYNARPMSARRRALQLAKQNPGRPMHINTPVRTPKRLMVFQNGDPSVKHNLMLQKRTTRT FEALLDYLSELMHFPVVKLHTPDGRRVDGLPALIICSGIVVAAGREAFKSGNYKTQKSSA STWLPARRMASKRLKQPASRKSHYVHSTFCMYFEACFCLDVLKIIWIASAYLASQKIPIH RSTLSPLIHSKGKKKPISSGKSKLFSPSSERYFVNQINHCIAGSECDLPSNNAESVELEA GHFLESVAETDGDSYHGDRGEGADNCIPGDDDIEKSFRVNQDGSMTVEMKVRLTIREEET IHWTTTLSRSSVANQLSAAESELENSSPESNILPPTQPNTMGTINGYNVKKDDHDDKDDM PPETSRLTSVEVDNEDDTKTHVGVVSPRRAPTPGPRRYRQKQASVESLKTILGDEIQENM VGSNSYRETTENGEVKEEYRMVRQCSSKPVPKPRGVGSVDINNYNKTQSTFKSGMAEILQ IQNGGEEVIESVMHIYEQQTCQDNFLANSQYNVQGVSIYGMMYGRTATSDTAHLSSRNDL ELELGRPSTASKSISVWRADQSLSSEFTIPKFKAGGSLLRNRVLNVHKTPLSMPTKDNDT PEWVSEASKENSTTGVKKVKKMFSKPKVKKNQVRKVTTPDKRRKESNENAPGNNKRVKTG GFSSNVSVRKMYGPKHGRSLIKNKKKLKGKEIYLNIENPKESAVKELHVTENRNKTSVSV KKNVLHVTFPTEAQVDGTLKRQRSMHEERRIDKESHDLSSSNINEYVENWLEKALPTVYP DPVEETQNVETPTMSPVETEGDIVPDVSEFNCEMDTEEDEPSLFKEITQTPSSLSLETTA FPNRTFENIATQTNLALENTTLPCPSDQSSQKTPLHSDTTQERLPINPSVEKTLFSNGLS VSPTSIILVEKPSPSDSHSLEETSMPKNISEEKPPITNGLSLENKSVPNSSSIEKTPVSN SLSPEKTQLPAKTQMEKAPLSNKDLDVSSIGSSPSYFMYSSPSSLGDEEQPLSSSPSSNK APSPTGHVFEKTTLFNHSTLKEPPSPKLPTKKTRLVSNLILEKQLTLRKASAEKSSISSD PTVEKVLMDKAPISNGLSSEKTSLLAKTRISNIVLDEAPLASSPSCFMSTSPTSLTSDER PISTTGHVLEKTTLFNHSTLKGPSTPKLPMKKKPIPPSPTLVNHEEMNGDDKLSNSDQGD STKVTAEEPLTKTQIPSHTDKLPPQPDMKPVLEKLCFSIQSIRQITHNNRPSCLEKSKSL PDFSSHVASTFGSSTKALLSFLSVITLKESFTNWNIPELNANSVSCAEALKMMESLREIA NMEGAEELKASLSELQKSTSTQLLQSWKGFQELNSKVRSRSSTPNSSEHNVSFETCPEKD YIIEEKSLDIDELIHELDLPGKLKEALAALPTGVSESMVEGDEIEMSKEANKKVSFPEER VNAKSTAVPKEEASNDNVLNIDANVDVKSIVKRFINIYHPKEVTENKMSPIPESQSSRQE QPFSSEEQDFKEDFTCHRSRQAANKEGSELEQDNWEEEAKCSDKQIDHDKEQTYSDIEQA YSLALHDGYLELQACPLKTKVKDGDIQSSYVEEEESLEEEQEYYIENALVEQENKCMELQ LSNEDGQSTAEQTRASSNQHEESEVTLVELKVSREEEESLEGGQEYYTENPHVEQEIKCM ELQVSCKESLEKDQASSEEEQECHVEDQLSYMVSENRCMEDECLEEEQQCHIEDQPSYVG LQVSYEERVSSLKEQATSEEEYECHIEDQPNHEEPEVKCLALQDSSEDGKSTPEEDQAIS DEELEHHVENQPNHEDTEIKCMDAKVSSEESMSNLEEQQASSEEELECHIENQSSHEEKW VKCMKMQVSREKIEFTPEEDKASLGEEEESHEDDLSYAKAHINVQDEQTHLWVKQTTQKE TECTVRETLPRLFKQHSIADRMDKDSGKNSAQHVSFEQQTDTAEEANFEDNQCSSEEKRV SYEEKLSSSDVEHVSVEDEPYPEEEYQETLEEEPSEEDKHYEKTEAKTTNCFEEPLPSVA ERVKILDKKIADVKQGKSITIATTGIKPFGQIEVSAVSGGDDAKEQDKTHVHTFKRTTWP INTSETVVMSPPAPRSLLAFSYDGCITREPDGNRVKSIKELFIAKSVVDNLYGQTRLPSQ NTSDLSDNRPETSGSGGHQSQTSTETSSGEDDSVKKSITKCVVRRTIERLYGKKDTNVKD RARESQPPPSPLKPKSREFPGKISLSPFHNAQTKGMSDLSYFNATSSVGTYSDPTRYVAF NAQVEPGDCFLIDKDRWLLRESVIRKSVSEPIDINKNTSASTEDVCKDTEEDVPYSLFGH TDLEDIVKSVKPLVQKCTYFNLPHGCDSDPHQDDLSPVSKGSAKGEVSKDSKDKTEKPKL WAEKNGIAFAPTDFKMPDNKVHPLIEGPGGGKVVVVQPGKRQPGKGQTDVMKIPQEPDAL EMLYFSCGQHCPIL NT seq 7785 nt NT seq  +upstreamnt  +downstreamnt atgagtgacgcccaggaccagttctcagggagtgggcacacagtgaccacgtcacgccac ccatatatcacagaccctatcgcctccaagcgcatctgcttctacaagagcggtgaccct cagttcagtggtctgcgcatggtcatcaacaaccgcaccttcaagactttcgatgccctc cttgacagcctctccaagaaggtcccgctgccattcggagtaaggaacatcaccactccc cgaggggtccatgcagtgcacacactagatgaactggaggatgggaaggcctatatctgc tctgaccagcggaaggtaaaacccattaacatggcagtagccaataagaagctaccaccc tggtacaatgcccgccccatgagcgcccggcgtcgggccttgcagctggccaaacagaac cctggcaggcccatgcacataaatacccctgtacgcacacctaagaggttgatggtattc cagaatggggaccccagtgtcaaacataatctgatgctacagaagagaaccactcgcaca tttgaggctctgctggattacttgtccgagttgatgcactttcctgtggtaaaactacac acaccagatggaagaagggtggatgggctcccagctctgattatatgctctgggattgta gtagctgctggtcgcgaggcttttaaatctgggaactacaagacacaaaaatcttctgct tcaacatggctgcctgctagacgaatggcatctaaaagactaaagcaaccagcatcccgt aagtctcattatgttcactcaacattttgtatgtattttgaagcatgtttttgtcttgat gttttaaaaataatttggatagcatctgcctatcttgcctcccaaaaaatacccatccat cgttctacactctctcctttgatccactccaaagggaaaaagaaacctatatctagcggc aaatcaaagcttttctccccatcgtcagagagatactttgtgaatcagataaaccactgc attgcaggaagtgagtgtgacctccccagtaacaacgcagaatctgtagaactggaggct ggccattttctagagtcagtggccgaaacagatggcgactcctaccatggcgataggggt gaaggggcagacaactgcatccccggtgacgatgacattgaaaagtcctttcgggtgaac caggatggcagcatgacagtggagatgaaggtgcgactaaccatccgggaggaagaaacc atccactggaccaccaccctgagcaggtccagtgtggccaaccagctcagtgcggctgag tctgagctggagaacagttctcctgagtccaacatcctaccaccaacacaacccaacacc atgggcaccatcaatgggtacaatgttaaaaaggatgatcatgatgataaggatgatatg cctccagagaccagcagacttaccagtgtggaagtagacaatgaggatgatactaaaaca catgtgggtgtggtctctcccaggagggctcctaccccaggacccaggagatacagacag aagcaggcctcagtggagagcctcaaaacaattttgggagatgagattcaggagaacatg gtaggttctaactcctacagagagacaactgagaacggagaggtaaaggaggaataccgc atggtcagacagtgcagcagcaagccagttcctaaaccaaggggagttggatctgtggat atcaacaattacaataagactcaatcgacttttaaatcaggcatggctgagatcttgcag atccaaaatggcggggaggaagtcatagaaagtgtaatgcatatatacgagcagcagacc tgtcaagacaatttcctggctaacagccagtacaatgtccagggtgtgtccatatatggg atgatgtacggaagaacagccacctctgacacagcccacttgtcctccagaaatgacttg gagctggagctgggtagaccctctacagcctcaaagtcaatcagcgtgtggagggctgac cagtctctttcatctgagtttaccatccccaaatttaaggctggaggatctctcctacgc aacagggtactaaatgtccataaaacccctctctccatgcccaccaaagacaatgacacc ccagagtgggtctctgaagcaagcaaagaaaactccaccactggtgtaaagaaagtcaag aaaatgttctcaaagcccaaagtaaaaaagaaccaggtccgtaaggttacaacaccagac aaaagacgtaaagagagtaatgaaaatgctcctggaaacaataaaagagtgaaaactggg gggtttagcagcaatgtatccgtaaggaaaatgtatggaccaaaacatggcagaagtctc atcaaaaacaaaaagaaactaaaaggaaaggaaatctatttaaatattgaaaacccaaag gaatcggcagtgaaagaattacatgttactgaaaatagaaacaagacttcagtttcagta aagaagaacgtattgcatgttacatttccgacggaggcccaggtggacggaacactaaaa aggcagaggtctatgcacgaggagagaaggattgataaagagagtcatgatctgagctct tctaatatcaatgaatatgttgagaattggttagagaaagccctcccaactgtgtaccca gacccagtggaggaaactcaaaatgtggagacaccaacaatgtctccggtagaaactgag ggagacattgttccagatgtatcagaattcaattgtgaaatggatactgaagaagatgag ccttctttgtttaaggaaataacacaaacaccaagtagtctatctttggaaacgactgca tttccaaatagaacatttgaaaatatagcaacacagaccaacctggctttggaaaacaca acattaccatgtccttctgaccaatcatcgcaaaagactccattacacagtgatactaca caggaaaggttgcccattaatccctcagtggaaaagacacttttctccaacggtctctcc gtctctcctacatcaataatcttagtagaaaagccatcaccatctgacagtcattcattg gaagaaacatcaatgcctaaaaatatctcagaagagaagccacctatcacaaatggtctg tcattggaaaataaatcagtaccaaatagctcctcaatagagaagaccccagtctcaaac agtctctcgcctgagaagacacaactgcctgctaaaacgcagatggagaaggcaccatta tccaacaaagacttagatgtgtcttccataggtagcagtccttcatatttcatgtattca tcacctagtagtctaggtgatgaagaacaacccttatcaagcagtccttcatcaaataag gctccatcacctactggccatgtatttgaaaagacaacattgttcaaccactccactctg aaagaaccaccatcacctaaactcccaacaaaaaagacaagattggtcagtaatctcatc ctggaaaagcaactaacacttagaaaagcttcagctgagaagtcttcaatatccagtgat cctactgtggaaaaggtgttgatggataaggcaccaatctccaatggtctctcatctgaa aagacatcactgcttgctaaaactcggatatccaacattgtcttagatgaggctccctta gctagtagtccctcatgtttcatgtcgacatcacctactagtctcacatcagatgaaaga cccatatcaaccactggccatgttttggaaaaaacaacattgtttaaccactccactctg aaaggaccatcaacacctaaactcccaatgaagaagaagccaatacctcccagtcccact ttagtgaatcacgaagagatgaacggggatgataagctgagcaattcagatcagggagac agtaccaaagtaacagcagaggagcccctaacaaaaacacagataccgtcacacacagac aaacttcctccccagccagatatgaaacctgtgctagagaagctctgtttctcaattcag tcaattagacaaatcacacacaacaatcgtccatcttgtcttgaaaagtcaaaaagcttg cctgatttctcctcccatgtggcctctacatttgggtcatctactaaagctctcctttct ttcttatctgttattactttaaaggaaagcttcactaactggaacatacctgaactgaat gcaaacagtgtaagctgtgctgaggctttgaaaatgatggagtctctgagagaaattgcc aatatggagggtgcagaggagttgaaagctagtctgtcagaattgcaaaagtcaacttcc acacaactgcttcaaagttggaagggtttccaggaactcaacagcaaagtcagaagtcgc agctcaacaccgaacagttcagagcacaatgtctcgtttgagacatgcccagagaaggac tacatcattgaagaaaagtcattggatatcgatgagctaatacatgagcttgacttgcct ggaaagttgaaggaagcattggcagcccttccaactggggtgagcgaaagcatggtggag ggggatgaaatagaaatgtctaaagaagcgaataaaaaagtgtcattcccagaggaaagg gtaaatgccaaatcaactgcagtccctaaggaagaggcttcaaatgataatgtgcttaat attgatgctaatgttgatgttaaatccatcgttaaaagatttataaatatttaccatccc aaagaggtgactgaaaacaagatgtcaccaatcccagagagccaaagcagtaggcaagag cagcccttctcctcagaagaacaagactttaaagaggattttacttgccatagaagcaga caggcagcgaataaggaaggttctgaacttgagcaggacaactgggaagaagaggctaaa tgtagcgacaaacagattgaccatgataaagaacagacatactcagacatagagcaggct tacagtttagcattgcacgatggctatttggaactgcaagcgtgtcccttgaagaccaaa gtgaaggatggggacatacagtcaagctatgtggaggaggaggaaagcttggaggaagag caggaatactatattgagaatgcacttgtggagcaggagaacaaatgtatggagctgcag cttagcaatgaggacggacagtccactgctgaacaaacccgggctagctcaaaccaacat gaggagtccgaggtcacacttgttgagttgaaggttagcagggaggaggaggaaagcttg gagggagggcaggaatactacaccgagaacccacatgtggagcaggagatcaaatgcatg gagctgcaggttagctgtaaggaaagcttagaaaaagaccaagctagctcggaggaagaa caggaatgtcatgttgaggaccaactaagctatatggtatcagaaaatagatgtatggag gatgaatgcttggaggaagagcagcaatgtcacatagaggatcagccaagctatgtgggg ctgcaggttagctatgaggaaagagtatctagcctcaaggagcaggctacctcagaggaa gaatatgaatgtcatatagaggatcagccaaaccatgaggagccagaggtcaaatgcttg gcgctgcaggatagcagtgaggacggaaagtcgacccctgaagaagaccaggctatctca gatgaagagctggaacatcatgttgagaaccaaccaaaccatgaagacactgagattaaa tgtatggatgcaaaggttagcagtgaggaaagcatgtctaatcttgaagaacagcaggct agctcagaggaagagctggaatgtcacattgagaaccagtcaagtcatgaagagaagtgg gttaaatgtatgaagatgcaggttagtagagaaaaaatagagttcacccctgaagaagac aaggctagcttaggggaggaagaggaaagccatgaagatgacttgagctatgcaaaggca cacattaacgtgcaggatgagcagactcacttatgggtgaagcagactactcaaaaagaa actgagtgtactgtcagagaaacactgcctagattgttcaaacagcattctattgctgac aggatggataaggatagtgggaagaatagcgcgcagcatgttagcttcgaacaacaaact gatactgcagaagaagctaactttgaggataatcagtgtagctcagaggagaagcgagta agctatgaagagaagctgtctagctctgatgtagaacatgttagtgtagaggatgagcca tacccagaggaggagtatcaggaaaccttagaggaagagccttctgaggaggataaacat tatgaaaagactgaagcaaaaacaaccaactgttttgaggagccattaccatctgtagca gagcgagtaaaaatactggataagaagattgctgatgtaaagcaagggaaaagcattact atagcgacaactggcatcaaaccgtttggccaaatagaggtttctgctgtctcaggcggt gatgatgccaaagagcaagacaaaactcatgtgcacacttttaaaaggacaacgtggcct ataaatacatcagagactgtagtcatgtcccccccagctccacgatccttgttggcattt agctatgatggctgtataactagagagcctgacggaaatagggtcaagtcaataaaggaa ttgtttatagcaaaaagcgttgtggacaatctgtatggacaaacaagactacccagccaa aacacctcagatctgtctgacaacagaccggagacttctggcagtggtggtcatcaatca cagacatcaactgagacgtccagtggtgaggatgattcagtgaagaaatccatcaccaaa tgcgttgtcaggagaacaatcgaaaggctttatggaaagaaagataccaatgtcaaagac cgtgcccgtgaaagtcagccaccaccatctcccctgaaaccaaagtccagagaatttcct ggtaagatcagcctttccccatttcataatgcacagaccaaagggatgtctgacttatca tacttcaatgccacaagctctgtaggcacatacagtgatccaacacggtatgtcgccttc aatgcacaggtcgagcctggagactgtttcctgatagacaaagacaggtggctcctcaga gagagcgtgatcagaaagtctgtctccgagcctattgatatcaacaagaacacatctgca tcaactgaagatgtgtgcaaagatacagaagaagacgtcccttactcccttttcggccac actgatttggaggacatagtgaagtctgtgaagcctttggtgcaaaagtgcacctatttc aatctgcctcatggctgtgactcagacccgcaccaggatgacctaagccccgtcagcaag ggcagtgctaagggtgaagtctcaaaggacagtaaagacaagacagagaaaccaaaactg tgggctgagaagaatggaatagcttttgcccctactgacttcaagatgccagataataaa gtgcaccctctaatagaaggcccgggaggtggaaaggttgtggtggtacagcctggcaaa cgtcagcctggcaaaggtcagacagatgtcatgaaaattccacaggagccagatgcgcta gagatgctctacttctcctgtggccagcactgccccatcctgtga

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