Oncorhynchus nerka (sockeye salmon): 115104531
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Entry
115104531 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 6, transcription factor 2-like
KO
K09368
POU domain transcription factor, class 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115104531
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115104531
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
FtsX_ECD
Zip
DUF755
Motif
Other DBs
NCBI-GeneID:
115104531
NCBI-ProteinID:
XP_029481752
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Position
LG22:26338422..26455988
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AA seq
670 aa
AA seq
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MITGQLSKPLLSLRSEMSAAELRAEDKAATPDSKLNDEPLLLSSEATGREDTPNKLYGAR
DGSVQSDASNSPSEQCHLGQSHPAYPVGPQSLLVAQQLAGGSPGLNQPILIPFNTGGHLG
GQQGLVLSLPTANIQGLVAAAAAQGIMTLPLQNLQATSSLNSQLQHLQQLQQLQQHHHQQ
QQHHHQQQQHHHQQHQHSHSHAHNQLSSRGRMTPPGLQQSSVSVPSPGSASSSTTSMTGS
GQPPQSSPPRQNQSPARSLPSPVTPPMPLQLNPLASQAAVAAAAAAMGSIAGSQVFGNAL
SNLQAGVTGQLVTNAQGQIIGTIPLMPNSGGPSSQSGGGNPALQVQPITPQLLTNTQGQI
IATVIGNQILPVINTQGITLSPIKPGQQLPQAQQLQTGPVSSQPNLLHMPHSQSPLRQVS
SSSSSSSSSSSALSVGQLVSNPQMAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQ
ALSAAEGPAYSQSAICRHTILRSHFFLPQEAQENTIGSSLTGKLNPGLLYPARFEKLDIT
PKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFE
KNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPGDLDLDLGPTAPMDP
LCDSLDEIPK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagttgagcaagccgctgctctccctgcgcagcgagatgagcgcggca
gaactccgggcagaggacaaggcggccaccccagacagcaagctcaatgacgagcccctg
ctcctgtcctccgaggccacgggcagagaggacactcccaacaagctctatggagcccgt
gacggctctgtccagtctgatgccagcaacagcccgtcagaacagtgtcatctgggtcag
tctcacccagcctacccagtaggaccacagtctctgctggtggcccagcagctggccggg
gggtcgccaggcctgaaccagcccatcctcatccccttcaacacgggcggccacctggga
ggccagcagggtcttgtgctttccctgcccaccgccaatatccagggcctggtggctgca
gcagccgcacagggcatcatgacgcttcccctacagaacctgcaagctacctcatccctg
aactcccagcttcagcacctgcagcagctccaacagttacaacagcaccaccatcagcaa
caacagcaccaccatcagcaacaacaacaccaccatcagcagcatcaacactcccacagc
cacgcccacaaccagctgtcatcgcggggtcgcatgaccccgcccggccttcagcagtcc
tctgtctcggtcccctcccctggctccgcctcctcctccaccacctccatgactggctct
ggccaaccgccacagtcttcgccccctcggcaaaaccaatcgccggcccgcagtctaccc
tcgcccgtcaccccgcccatgccactgcagttgaaccctctggccagccaggcagcggtg
gcggcggctgcagcagctatgggctccatcgccgggtcccaggtctttggcaacgccctc
tccaacctgcaagctggagtcacgggtcagctggtcaccaatgcacaaggacagataatt
ggaacgatcccactgatgcccaactctggggggccctcgagccaatcagggggcggaaac
cctgcgctgcaggtccagccaattacacctcagcttctgaccaacacccagggccagatc
atcgccacggtgatcggcaatcagatcctgcctgtcatcaacacccagggaatcacgctg
tcaccaatcaagcctggacagcagctgcctcaggctcagcagcttcagacaggcccagtg
tcgtctcagcccaacctgctccacatgccccacagccagagtcctctccgccaggtctct
tcctcctcctcatcatcgtcctcttcctcctccgctctcagtgtgggtcagctggtcagc
aacccccagatggctcccagcgaggtggatggggtcaacctggaggagattcgggagttt
gccaaagcattcaagatccgtcgcttgtcccttggcctgacccagactcaggtgggacag
gcgctcagcgcggccgagggcccagcctatagtcagtctgccatctgcagacacaccatc
ctgagaagccactttttcctaccacaggaagcccaagagaacactataggtagcagtctg
acaggcaaactgaaccctggccttttatatcctgccaggtttgagaagttggacatcacc
ccaaaaagcgcccagaagattaagcccgttctggagcgctggatggccgaggccgaggcc
cgccatcggtccggcatgcagaacctgaccgagtttattggcagcgagccctccaaaaaa
cgcaagcggaggacctcgttcaccccgcaagcgctggagatcctaaacagccacttcgag
aagaacacgcacccctctggacaggaaatgaccgagatagccgagaaactgaactatgac
cgcgaggtggtccgcgtctggttctgcaacaagaggcaagcgttgaaaaacacaataaag
cggttgaaacagcccggtgacctggacctggacctcggcccgaccgcgcccatggaccct
ctctgtgattctctggatgagatcccaaaatga
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