Oncorhynchus nerka (sockeye salmon): 115104564
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Entry
115104564 CDS
T07952
Symbol
rab5a
Name
(RefSeq) ras-related protein Rab-5A
KO
K07887
Ras-related protein Rab-5A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
one04144
Endocytosis
one04145
Phagosome
one04148
Efferocytosis
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115104564 (rab5a)
04145 Phagosome
115104564 (rab5a)
04137 Mitophagy - animal
115104564 (rab5a)
04148 Efferocytosis
115104564 (rab5a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115104564 (rab5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115104564 (rab5a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115104564 (rab5a)
04031 GTP-binding proteins [BR:
one04031
]
115104564 (rab5a)
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
115104564 (rab5a)
Endosome - Lysosome transport
115104564 (rab5a)
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115104564 (rab5a)
Exosomal proteins of other body fluids (saliva and urine)
115104564 (rab5a)
Exosomal proteins of colorectal cancer cells
115104564 (rab5a)
Exosomal proteins of bladder cancer cells
115104564 (rab5a)
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
115104564 (rab5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
DUF1327
Motif
Other DBs
NCBI-GeneID:
115104564
NCBI-ProteinID:
XP_029481784
LinkDB
All DBs
Position
LG3:11486648..11494516
Genome browser
AA seq
216 aa
AA seq
DB search
MASRGGATRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYAEDNSLLFMETSAKTSMNVNEMFMAIAK
KLPKNEPQAAGANSGRNRGVDLTETAQPASRSCCST
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaggggtggcgcaacacgccccaatgggcctaacacaggcaacaagatctcc
cagttcaaattagtactcttaggggagtccgctgtgggaaagtccagtctggtacttcgt
tttgtcaagggccagtttcatgaattccaagagagcacaattggagctgccttcctgact
cagacagtatgtttggatgacacaacagtcaagtttgagatctgggacacagctggtcag
gagcgctaccacagcctagcacccatgtactacagaggtgcccaggctgccatcgtggtc
tacgacataactaacaaagagtcctttgcacgagcaaagaactgggttaaggagcttcag
agacaagccagtccaaatattgtaatagcgttggctgggaacaaagctgaccttgcaaac
aaacgagcattggattttcaggatgcccagtcatacgcagaggataacagtttactgttc
atggaaacatcagcaaagacctctatgaacgttaatgagatgttcatggctattgcaaag
aaattacccaagaacgagcctcaagctgccggagcgaacagcggacggaaccggggagtg
gatcttacggagacagctcagccagccagccgctcctgctgcagtacctaa
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