KEGG   Oncorhynchus nerka (sockeye salmon): 115104564
Entry
115104564         CDS       T07952                                 
Symbol
rab5a
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04137  Mitophagy - animal
one04144  Endocytosis
one04145  Phagosome
one04148  Efferocytosis
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115104564 (rab5a)
   04145 Phagosome
    115104564 (rab5a)
   04137 Mitophagy - animal
    115104564 (rab5a)
   04148 Efferocytosis
    115104564 (rab5a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115104564 (rab5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115104564 (rab5a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115104564 (rab5a)
   04031 GTP-binding proteins [BR:one04031]
    115104564 (rab5a)
Membrane trafficking [BR:one04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115104564 (rab5a)
 Endosome - Lysosome transport
    115104564 (rab5a)
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115104564 (rab5a)
  Exosomal proteins of other body fluids (saliva and urine)
   115104564 (rab5a)
  Exosomal proteins of colorectal cancer cells
   115104564 (rab5a)
  Exosomal proteins of bladder cancer cells
   115104564 (rab5a)
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115104564 (rab5a)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 DUF1327
Other DBs
NCBI-GeneID: 115104564
NCBI-ProteinID: XP_029481784
LinkDB
Position
LG3:11486648..11494516
AA seq 216 aa
MASRGGATRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYAEDNSLLFMETSAKTSMNVNEMFMAIAK
KLPKNEPQAAGANSGRNRGVDLTETAQPASRSCCST
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaagtaggggtggcgcaacacgccccaatgggcctaacacaggcaacaagatctcc
cagttcaaattagtactcttaggggagtccgctgtgggaaagtccagtctggtacttcgt
tttgtcaagggccagtttcatgaattccaagagagcacaattggagctgccttcctgact
cagacagtatgtttggatgacacaacagtcaagtttgagatctgggacacagctggtcag
gagcgctaccacagcctagcacccatgtactacagaggtgcccaggctgccatcgtggtc
tacgacataactaacaaagagtcctttgcacgagcaaagaactgggttaaggagcttcag
agacaagccagtccaaatattgtaatagcgttggctgggaacaaagctgaccttgcaaac
aaacgagcattggattttcaggatgcccagtcatacgcagaggataacagtttactgttc
atggaaacatcagcaaagacctctatgaacgttaatgagatgttcatggctattgcaaag
aaattacccaagaacgagcctcaagctgccggagcgaacagcggacggaaccggggagtg
gatcttacggagacagctcagccagccagccgctcctgctgcagtacctaa

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