Oncorhynchus nerka (sockeye salmon): 115104580
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Entry
115104580 CDS
T07952
Symbol
arx
Name
(RefSeq) homeobox protein ARX isoform X1
KO
K09452
homeobox protein aristaless-related
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115104580 (arx)
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115104580 (arx)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Transforming_StpA_StpB
Motif
Other DBs
NCBI-GeneID:
115104580
NCBI-ProteinID:
XP_029481797
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Position
LG22:complement(10139895..10148360)
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AA seq
467 aa
AA seq
DB search
MTSQFEEDIHDRGECKSKSPTLLSSYCIDSILGRPSPCKVRLIGAQSLTALPGRQEHDKQ
TEDPLSLDTDMHLPPKMRRLYGPGGKYLDHGRGLVHDIGEKLDKERLLVDQACESLKIIQ
APQVSISRSKSYRENASLIRGEGGQSPTEGPEDGPRLRLGELGSMKFDEDAGKEEESCGE
TMGLSPKDDERESLHAGDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEEL
ERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQTHPSGLPFPGP
LSAAHPLSHYLDGGPFPPHPHPVLESAWTAAAAAAAAFPGLAHPHSNHSGQHLGTPLGLG
TFLGTAAMFRHPAFMGPTFGRLFSSMGPLTSASTAAALLRQPAPPVETPSIPPPVLSEPS
SSSPSSLAAADRRASSIAALRLKAKEHSAQITQLNILPSGAPGKEVC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgactagtcagttcgaagaagatatccacgaccggggagaatgtaagagtaaatcgccc
actctgctctcctcctattgtatagacagtattctgggccgaccgagcccctgtaaagtc
aggctgataggggcgcaaagtttgacagctctacccgggagacaggagcacgacaagcag
accgaagatcccctatccctagacacagacatgcaccttccaccaaagatgcgccggctc
tacggaccaggggggaagtacctggaccacggccggggtttagttcatgacataggggag
aaattggacaaggagaggctcctggtggaccaagcctgcgagagcctcaaaatcatccag
gctccacaggtgagcatcagccggagcaaatcgtacagggagaacgcgtccctgatccgg
ggagagggaggccagagtcccactgaagggccggaagatgggcctagactaaggctgggc
gagttagggtcgatgaagtttgacgaggacgcgggaaaagaggaggagagctgcggggag
acgatgggtctctccccgaaggacgacgagagggagagcctccacgccggagatggagac
gtgagggacggtgaggacagcgtgtgtctgtcggcaggcagtgattcggaggaaggaatg
ctaaaacgcaagcaaagaagatacaggactacattcaccagctatcagctggaggagctg
gagagggctttccagaagacacactaccccgacgtcttcaccagagaagagcttgcgatg
cggctggatctgaccgaggcgcgcgtccaagtatggtttcagaatcgtcgtgctaagtgg
cgtaagcgtgaaaaggcaggtgtccagacacacccctctggactccctttccctggcccc
ctgtcagccgcccaccccctcagccactacctggatgggggtccctttcccccacaccct
caccctgtcctagagtctgcctggacagctgctgctgccgcagcagctgcatttcctggt
ctagctcatccccatagcaaccactcaggccagcacctagggacaccgctgggcctcgga
acattcctgggtacagccgctatgttccgtcaccctgccttcatgggacccaccttcggc
aggctcttctccagtatgggccctctgaccagtgcttccaccgccgctgcactcctccgc
cagcctgccccgcccgtcgagactccctccatccctccgccagtcctctccgaaccttct
tcctcctctccctcctccttagctgcagcggatcgcagggcctccagtattgcagctctg
aggctgaaggctaaagagcactctgctcagatcacccagctcaacatcctgcccagcgga
gctcctgggaaggaggtgtgctga
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