Oncorhynchus nerka (sockeye salmon): 115104628
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Entry
115104628 CDS
T07952
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115104628
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115104628
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115104628
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
115104628
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
115104628
NCBI-ProteinID:
XP_029481845
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Position
LG3:11688520..11705323
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AA seq
450 aa
AA seq
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MFDYMDFLAVGPGETLDFYTASPCMLLEPSQTACFTGLTETDWQIHRVAQSVETQSSSSE
DLFASPLSPLPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDSN
CIINKITRNRCQYCRLQRCFAAGMSRECVAHKGNHTRAVRNDRSKRKEKKETPKMTIIET
YELTAELGCIVEKICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCII
RVVEFAKRVPGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQI
HNAGFGPLTDQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLE
ALKIYSRKRRPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEM
ENLEKQKHSEEEQRADKNITHTHSPCPHST
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggggaaacgctggacttctatact
gcaagtccttgtatgctcctggaaccatctcaaaccgcatgcttcactggactaacagaa
acggattggcaaattcatcgggtcgcgcaatctgtggaaacccagagctccagctcagag
gacctgttcgccagtcctctctcacctctgccccctcctcgcacctacaaaccctgcttc
gtgtgccaagacaagtcctcaggctaccactatggcgtcagtgcttgtgagggctgtaag
ggtttcttccgtagaagtgtccagaagaacatggtttacacgtgccaccgggacagtaac
tgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgcttc
gccgcgggcatgtccagggagtgtgttgcccacaagggaaatcacaccagagctgtcagg
aatgaccggagtaagaggaaggagaagaaggagactcccaagatgaccatcatcgagaca
tatgagctgacagcagaactgggctgtatagtggagaaaatctgtagggctcatagagag
accttcccttccctctgccagttgggcaaatacactacaaactcaagctcagacactagg
atccagttggacctggggctgtgggataagttcagtgagctggccaccaaatgtatcatc
agggttgtggagtttgccaaacgggttcctggtttcaccggcctgactataactgaccag
atcaccctcctcaaagcggcctgtctggacattctgattctgcggatctgtacaaggtac
actcctgaccaggacactatgaccttctcagacgggctgaccttgacccgtacacagatc
cacaacgctggctttggcccgctcacagaccaggtgttcaccttcgccggccagctgctg
cccttggagatggatgacacagaaagtggcctcctcagcgccatctgcctggtgtctgga
gaccgccaggacctggaggagccgtctaaggtggaggtcctgcaagagcccttactggag
gccttgaagatctactcccgtaaacgccggcccagcatgccccttatgttccccaaggtc
ctcatgaagataaccgacctgcgcagcatcagcgccaaaggagctgagcgagtggtgacg
ttgaagatggagatcccaggttccatgcctcctcttatccaggagatgctggaggagatg
gagaacctggagaagcagaagcattctgaggaggagcagagagcagacaagaacatcaca
cacacacactctccatgtccacacagtacatag
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