Oncorhynchus nerka (sockeye salmon): 115104658
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Entry
115104658 CDS
T07952
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03020
RNA polymerase
one03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115104658 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
115104658 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115104658 (polr2j)
03400 DNA repair and recombination proteins [BR:
one03400
]
115104658 (polr2j)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115104658 (polr2j)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115104658 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
115104658
NCBI-ProteinID:
XP_029481870
LinkDB
All DBs
Position
LG22:48809015..48811186
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AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIRQQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccaccggcattcgagtcatttctgttgtttgaaggggaaaagaaaatcaca
atcatcaaggacacaaaagtccctaacgcctgcctcttcacgttgaacaaagaggatcac
acgcttggtaacatcatcagacaacaacttctgaaagacccccaagtgctatttgctggc
tacaaggtccctcatccgctggagcacaagattgtgatccgtgttcagaccacaccagac
tacagtcctcaggaggctttcactaatgcaatcactgacctcatcagtgagctgtccttg
ttggaggagcgattcagggttgcaattaaagacaagcaagaaggaattgaatga
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