Oncorhynchus nerka (sockeye salmon): 115104694
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Entry
115104694 CDS
T07952
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115104694
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115104694
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
115104694
NCBI-ProteinID:
XP_029481905
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Position
LG22:57563302..57570831
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AA seq
1146 aa
AA seq
DB search
MENLTPEQWREIVNKKMRFPLELISAIQEGNIVMVCGLLNTGDGIIRQLDDSEDRLWREA
LNLSIRLGNEDTMDALLQGIKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSLAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQKGHIIPRPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFGLSRELRKLSKKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLTRLRLAVNCN
QKQFVAHPICQQVLSSIWCGNLSGWRGSKTAWKLLVSVGIFFTMPLLCLVYWIAPKSKVG
KILKIPVIKFLLHSASYMWFLITLLGESITMELYRDQFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCMDMMVLSMYLASFTLRVLIMLKGHFLCQAPDGTEECAYF
TQTVRQNWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAQESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVTQPYLGRFNETFRFLFWTMFGVANQDYVDMPEFVVAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYLIRGIFRQICCCCTLNSTPDYPPITSMSNGKEVDGGGSGENQIPYRQ
QVIRALVQRYIESERRKFEETKRKDVGNRITELNKVVGRLHAEMKAIMQVLVDSGQAAGD
IPNTDGSSILGKYIMGAKNNFRGFDNRLDNKHTPLRVTVEVGQQGKVAEEKAGAVVMLDD
KGMEVEHDRKVEIGKDGRTAMGLDNTAEMEKEAKDGGMVVKQEVKVDVGLDGAEGTKQVG
DMDVVKMEEGRADGRKGERRVEEVVKESEQNMENGGKGEVRVEEMVKETEHKMEKRGNSD
GKGEKGINKARTNEMVEKRVEGEASKAEVRMEVKDKGKKVDSSVDNTIRDKGVVGGDKTV
NEMGGCGNEGKVDMGLEDVKEVERKVKAMELKEKRVVGKINVAERWNKGEGRAVEENVTE
RKAAKAGMVVVENTARAGVNILGEKVVPSPTGSSSSQDTGFGSQEGEGSINGGPMRPAYL
SASSPD
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacaccggagcaatggcgggagatagtgaacaagaagatgcgcttccct
ctggagctgatcagtgccatccaggaggggaacatagtgatggtgtgtggcctgctgaat
actggtgacggtatcatccgccagctggacgactccgaggaccggctgtggagagaggcc
ctgaacctgtccatccgcctgggcaacgaggacaccatggacgccctcctccagggaatc
aagtttgactttcgccagatccatgaagctctgctggttgccgtggacaccaaccagccc
cgcgtggtgaaaaggctcctcgaccgcctggaccaggagaagggcaacaagatggatgtg
cgatccttctccctggccatcttcgaccactctatcgacgactcgcagttcgccccaggc
gtgaccccgctgaccctggcctgtcagaaggacctgtatgagattgtcaccatgctgacc
cagaagggccacatcatcccaaggccacacaagatctcctgtgcctgtctagagtgtagg
aacggacgacagtatgacctgctgaagttctccctgtctcgcatcaacacctaccgtggc
attgccagccgggcctacctgtccatcacctcagaggatgccatgctcagtgccttcggc
ctcagcagggagctacgcaaactctccaagaaggaacccgagttcaagcctcagtacttg
ggtctggaggagctgtgccaggagtttgcggtggagctgctggggatgtgccgtaaccag
agtgaggtcaccaccatcctgaacagctgtggagatgaaagccaggacgcccttgaccag
caggccttcgaggagggcatccccaacctgacccgcctgaggcttgccgtcaactgcaac
caaaaacagtttgtagcccaccctatctgccagcaggtgctgtcctctatttggtgtggg
aacctgtctggctggagaggcagcaagacggcctggaagctgctggtgtctgtgggtatc
ttcttcaccatgcccctcctctgcctcgtctactggattgcacccaagtccaaggtggga
aagatactgaagattccggtgatcaagttccttcttcactctgcctcctacatgtggttc
ctcatcacattgttgggagagtccatcaccatggagttgtacagagatcagtttgcttcg
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggtcgggttcttctgg
tatgaatgtaaggaggtgtggattgaaggtctgcggagctacttcctggactggtggaac
tgcatggacatgatggtgctcagcatgtacttggcctccttcactctgcgtgtcctcatc
atgctcaaaggtcacttcctgtgccaggcccctgacgggactgaggagtgtgcctacttc
acccagactgtgcgccagaactggcatcaggaggacccccagctcatagctgaggtactg
tttgcagtgaccagtatgctgagcttcacccgcttggcctacatcctgcctgcacaggag
tccctgggtacactccagatctccatagggaagatgatcgatgacatgatgaggttcatg
ttcatattgatgattattggaactgctttcctctgtggtatcaataacatctatgttcct
tatgtcacccaaccatatcttggaaggtttaacgagacctttcgtttcctgttctggacc
atgtttggggtggccaaccaggactatgtggacatgcccgagtttgtggttgcagagttt
gtgggcagaatcctttacggcatcttcaccctggtgattgtgatcgtgctactcaacatg
ctcattgcaatgatcaccaactccttccagaagattgaggatgatgctgacgttgagtgg
aaatttgcccgatccaagctctatctgagttacttccgagaaggtctcactatgcctgtc
cccttcaacatcatcccctcacctaaggcctttttctacctcatacggggtatttttcgt
cagatctgctgctgttgtactttgaactcgacaccagactatccccccataacctccatg
tcgaacgggaaggaggtggatggtggagggtcgggggagaaccagataccttatcgccag
caggtgatacgggctctggtgcagcgctacattgagtctgaacgtcggaagtttgaggag
accaagagaaaagatgtgggtaatcggatcacagagctaaacaaggtggtgggcaggctg
catgctgagatgaaggccatcatgcaggttctggtggactctggccaggctgcaggagac
atccccaacactgatggctcctccatcctggggaaatacataatgggagccaagaacaac
ttcagggggttcgacaacaggctggacaacaaacacacacctctacgggtgactgtggag
gtgggacaacagggaaaagtagcggaagagaaggctggagcagtggtgatgctagatgac
aaagggatggaggtggaacacgacagaaaggtggagataggaaaggatggaaggacagca
atgggactagacaacacagcggagatggaaaaggaggcaaaggatggagggatggtggtc
aaacaggaagtaaaggtggatgtggggctagatggagcagaggggacgaaacaggtagga
gacatggatgttgtgaagatggaggaggggagagctgatggaaggaagggagagagaagg
gtggaggaggtagtgaaggagtcagaacagaacatggaaaatggaggaaagggagaggta
agagtggaagaaatggtaaaggagacagagcacaagatggaaaagagaggcaacagtgac
gggaagggggagaaggggataaataaggcacgcaccaatgagatggtggagaaaagggtg
gagggagaggccagtaaggcagaagtaaggatggaagtgaaagacaaagggaaaaaggta
gatagcagtgtggataatacaatcagggacaaaggagttgtaggaggtgacaaaacagtt
aatgaaatgggaggatgtgggaatgaaggtaaagtagacatgggattggaagatgtgaaa
gaggtagagaggaaggtcaaagcgatggaactaaaggagaaaagagtggtggggaagatc
aacgtggcagagaggtggaataagggggaggggagggcagtggaggagaatgtgactgag
aggaaggctgccaaggctggcatggtggtggtggagaatactgccagggctggggtgaat
atcctgggggagaaggtggttccttccccgaccggcagcagcagctcacaggacactggc
ttcggctcacaagaaggggaggggtccatcaatggaggaccaatgagacctgcatatctg
agtgcatcatctccagattag
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integrated database retrieval system
