Oncorhynchus nerka (sockeye salmon): 115104768
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Entry
115104768 CDS
T07952
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115104768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115104768
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115104768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
115104768
NCBI-ProteinID:
XP_029481975
LinkDB
All DBs
Position
LG22:47722355..47735746
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AA seq
1174 aa
AA seq
DB search
MSSREKRLIALISLVVCATAIFCVVLYYIPTLLYIAFIIGVCCVACYYHSGESLYVRLGH
HPRRGLTIPPVLRRWLPGIANGVPTAGRVRSRTVKDDVRESVVFTGQRRFDSAICRKDAT
HSDSFILSPRDILMGSYIGKAKSPASVVGRPRAGASSGANTIAREQLTLRERLARPNQAV
ITPNRRLSFGGEPLGTMGRFTITPQRHYPLQQTGTSSVGILPPTQWDGFRKKNILTPRNS
PAVHSPVTVKIARPDHNTIQSQLFDHLNSPGVLGSPGLGAPADPCSRETVLSVLKESRKR
VVEDDRSFTAGQKSKRRRHDSSGSAHLAFEPLLPNGAPSQLVLNSLKRGLNAMVEESTMK
RSRTSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGITRWKKASTRSLSPLSSPGSSRSQ
TPERASKKPREEDARSPSSVSLARSDKTLTDPAPTTGKLSPAPEVPVASASSDSAGSGKR
KRKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLKEPEPEKPAPVVT
TSSKPPVSDNPTPTLLASHLTVSMPARVAAPIPVINLDPVPSNTVNTAPTSTSFPVTNTP
AANPLLESLKMMRNNPLTSAAADNPTAVTTPAPLVPAEQKSKTSLTAALTLPSSQSQPAP
PSLSQPAPPSLSQPAPPSRSQPAPPSRSQPAPPSRSQPAFTQALSQVTKAPSSVRILGGA
SLFGMANPLTAPSSSLGPTTTTTTTETTSSNNPLLASVFKPIFGATALAPEGTPALPTFK
PIFGSATATSAFGQPASCSAPSNASTSAIVFSRLTNSSTVAPATSLFTGLSNSTNPATPP
SVKSLFGNWSALPATTAATTTATGSTFQFGTASTTAPGPTLSSTAAATTSNSGFSFGAMT
TTSATTQPTPSATTQGGFTFGQPVATQSSTTASFGGFGMATAATAPAPANQSTFTFGKSS
FEAPAASVFPGAIQAPAATAAANPFTFGSPATGATPAPFAFGAAATTGTSTFGTTTKLAF
GANSTGFAFGNTTGTPAAPAFGSATQTVGILPASAPTFSFGGVSTQQAPATPAQPATGGF
NFGAAISGTQFGTSNPTTQTPGFNFGTSTPAFGQSTAAGPVPFGSPGTPVQGFSAMGSSS
FGSPSAPSFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagagaagcggttaatagcgcttatctctctcgtggtctgtgctaccgca
atattctgtgtagttctgtattatattccaacattgctttacatagctttcattattgga
gtttgttgcgttgcctgttattatcacagcggagaatctctttacgttaggttaggccat
catccacgccgtggtctgacaattccacccgtgctgcgacgctggttgccagggattgca
aacggagtacccacagcgggaagagttagaagtcgcacggtcaaggatgatgttagggaa
tcagtagtatttactggccaacgacgtttcgatagcgctatttgtcggaaagacgcgaca
cacagtgactcatttattctcagtcctcgggatatactcatgggaagttacattgggaag
gcaaaaagtcctgcctcagttgtggggaggccgcgagcgggtgcaagttcgggtgctaac
accatcgcacgagaacagttaactttacgcgaaagattggcgcgacccaaccaggctgtc
attactccaaacagacgactgtcattcgggggcgagccccttggcactatgggcaggttc
accatcactccccagcgccactaccccctccagcagactggcacctcctctgtgggcatc
ctgcccccgacccagtgggacggcttcagaaagaagaatattctcacccctcgcaactct
ccggcagtccacagtccagtcacagtgaagatcgctaggccagatcacaacaccattcaa
tcccagttatttgatcatttgaactccccgggagtccttggctctccaggcctgggggcc
cctgcagacccctgctccagggagactgttctgagcgtgctcaaagagagtcgcaaaaga
gtggtggaagatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgccatgac
agcagtgggagtgctcacttggcatttgagccactactgcccaatggagctccatcacag
ctggtgctgaattctctgaagcgagggctgaatgctatggtggaggagtcaacaatgaag
aggtcacgcacctcctccatcagctctgtgagctgtggcctgacccccagcggcaccctg
ggctcggtccgcaactccatccgtagctccctcagctcatcacaaggcattactcggtgg
aaaaaagcctccacccgcagtctctccccgctctccagccctgggtcgtcccggtcccag
accccagagagagcctctaaaaagcccagggaagaggacgctcgctcacccagctccgtg
tccttggcgaggtctgacaagacgttgacagacccagcaccaaccactgggaagctgtct
ccagcccctgaagtccctgtggcttcagcctcgtcagactctgccggtagtgggaaacgg
aaacgtaagattccgctggtgtccagccgtagaggagaccaaatctctttgcctccacct
cctgagttgggctacaccatcacggtgaaagacctggatcaggagaagaaagccgctctc
agccagatcaacacagtcctcaaagagcctgagccagagaagcctgctccggtagtgacc
acatcttctaaacctcccgtgtcagacaaccccacacccaccctgctggccagccatctt
accgtatcaatgcctgctcgtgtggcggctcctatccctgtcatcaacctagaccccgtc
ccctcaaataccgtcaacacggccccaacctccacctccttccctgtcaccaacacccct
gcagccaaccccctcctggagtctctgaaaatgatgaggaacaaccccctcaccagtgct
gctgctgacaatcctacagcagtgacgacccctgcaccactggtgcctgcagagcagaag
tcgaagaccagcttgacggctgccctcaccctaccctcctctcagtcccagcctgcacca
ccctccctctcccagcctgcaccaccctccctctcccagcctgcaccaccctcccgctcc
cagcctgcaccaccctcccgctcccagcctgcaccaccctcccgctcccagcctgccttc
acccaggcgctgagccaagttaccaaggcacccagcagtgtccgcatcctgggtggagcg
agcctgtttggaatggccaatccactgactgccccgtcctcatcactgggccccaccaca
accaccaccaccacagaaacaaccagtagtaataatcccctcctggcctctgtgttcaag
cccatcttcggggccacggccttagccccagagggcacacctgctcttcccacctttaaa
cccatatttggaagtgccacagccaccagtgctttcggacagccagcctcctgctcagcc
ccctccaatgccagtacgtctgccatagtgttcagcaggctaaccaacagcagtacagtg
gccccagccacctccctgttcactgggctgtctaatagcaccaacccagccaccccgcca
tctgtcaagtctctgtttggaaactggagtgcgctacctgcaacgactgctgccacaacc
actgccacaggaagtaccttccagttcggcaccgcctccaccacagctcctggacccact
ctcagctccactgcagccgccaccactagcaacagcggcttttcgtttggtgcgatgacc
accacctctgccaccactcaacccaccccctcagctaccacccaggggggattcaccttt
ggccagcctgtagccacccagagctctaccactgcatccttcggtggctttggcatggcc
actgcagccactgctcctgcacctgcaaaccagtccactttcacatttgggaagtcgtcg
ttcgaagctccggcggcatcggtgttccccggtgcgattcaggccccggctgctactgcg
gcagctaatcctttcacatttgggtcacctgccactggggccacccctgccccttttgct
tttggtgctgctgccactacggggacctctacctttgggaccaccactaagctggcattt
ggagccaactccacaggttttgcatttggcaacaccaccggcaccccagcagcccctgca
tttggctctgccacccagactgtcggcatactcccagcctccgccccaactttctcgttt
ggtggtgtgtccacacagcaggcccctgctacccctgcccagcctgccaccggaggattc
aacttcggcgcagccatttcaggcactcagtttggaacctctaaccccacaacacagaca
ccaggcttcaactttgggacgtctacccctgcttttggccagagcacagctgcaggtcct
gtcccctttggaagcccaggaactccagtccaaggattcagtgctatgggatcctcatca
ttcggctctccatcagctccttcgttctccattggcgctggctccaaaacatcaggggcg
cgccagaggctacaggcccgaaggcagcaccccaggaagaagtag
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