Oncorhynchus nerka (sockeye salmon): 115104785
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Entry
115104785 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115104785
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Other
115104785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
Ig_6
Interfer-bind
Sp38
DUF6034
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
115104785
NCBI-ProteinID:
XP_029481986
LinkDB
All DBs
Position
LG22:complement(58591077..58683803)
Genome browser
AA seq
2051 aa
AA seq
DB search
MWLVTLLLLYSLREVHSEDVGSTRLYFVNASLQRLTYSSSVGVSLPCPAGGTPTAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPNIRVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIVPGNRFFLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESSPSILDSFQAGEVSAG
QSVELPCMAAGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGALYVIDPLRVTLSPKSLKTGISSTLFFTCAVEGSPEYTVAWYRNTEPIVPDQH
ISIQGSHNDTLQITAAQKSHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVA
PGEPFSLMCASKGAPPPSITWTLDDEPVVRDSAYKTSQYTLSDGLTVSHVNVSSPAIRDG
GVYRCAARNSAGSAEYQARINVRGSPRIREMRDITAVAGRNTFITCRVIGYPYYSIKWFK
DGMLLPDNHRQVVYENGTLRLSDVQKGMDEGTYLCSVLIQPQTSIDQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVGIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLVVTVPPRFVVQPNNQDGIYGKAGVLNCSVEGYPP
PKVMWKHAKGIGNPQQYHPVPLTGRIQIMFNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMVLTVKIPAMITSHPNTTMAIKGQMKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDTWDHKYTTRNISPTNNQANIVELHPACVY
SIRMYSFNKIGRSQPSKELTISTEEAQPDGPPMEVILQPMTSQSIRVTWRAPRKELQNGL
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGE
WGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDRDSKLLSSL
SSHLGFPHAIRPYMPSSPSKVLLYHYTMVLHSVNNRTCISLPQAPSEYEANPEMLFYRIT
HLTRGKQYLIWASAVTTAGRGNISEKVTVEPAGKAPAKILSFGGTVTTPWVKEVRLPCSS
VGEPTPTIKWTKDSEDSTIPVTVDGQRQILSNGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFI
SSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKEQPLLTHINS
THAGLNLQGWTSGGCPITALLLDFRPKGTWAWQSLKANATAQLFLSELREATWYELKMKA
CNSAGCGNQSSQFATTDYDGSTIPPISSAHEDRDDVKKLFSIGSPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSMDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKAVAPVTDTEFSQSVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKC
VKSAHSSRNRYSSQWTLSRPGQSQSTASARTLTSDWRTMGSHGITATESDSYSASLSQDT
DKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDP
ADSMTSLSTPSETGLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEFCNLPLYMKTDP
FFRKQAELHDPCPAVPPREASIRSLAQRAYHTQGRHMTLDPSKQQALTLGHSGLGSLGMS
SGTATLPQRTLTMPCSNPAATASTSSTSSNPTGSSTKMGGSRDSLLENSSSALGRLQKQG
VGAYSKSYTLV
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgtactctctccgggaagtacacagtgaggatgtg
ggctctaccaggctgtactttgtgaacgcatccctgcagaggctgacctactccagctcg
gtgggggtgtctctgccctgtccggcgggcggcacccccaccgccatcctgcgctggtac
ctggccaccggcgatgacatctacgacgtgccccacatccgccacgtccatgccaatggc
accctccaactctaccccttctcaccctccgccttcaactcctacatccatgacaacgac
tacttctgcaccgcagaaaaccaggctggcaagatccgaagccccaatatcagagtcaaa
gctgtgttcagggagccgtacactgtgcgtgttgcagaccagcgctccatgcggggcaac
gtggccgtgttcaagtgcctcattcccaccgccgtgcaggagtacgtcagtgtggtgtcc
tgggagagagacactgtctccatcgtcccaggtaacaggttcttcctgacgtcctttggt
gctctgtacatctcagatgtccagaaggaggatgccctctccacctaccgctgcatcacc
aagcacaaatacagcggagagacacgtcagagcaatggagccaggctgtctgtcatggac
cccaccgaatcgtctccctctatcctggacagtttccaggcgggggaagtctcggctggt
cagagtgtggagctcccctgcatggcagcagggtaccccagccccacggtgcgctggcta
aaggacgggcgcccgctgccctccgatgcacgctggacgcggcgcctcacgggtctgacc
atcagtgacctcaggcaggaggacagcggtagctacgcctgtgaggtcaccaacagcttc
ggctcgaaggaggtgtccggagcactctatgtcatagaccccctgcgagtgaccctctcc
cctaagagtctgaagacgggcatcagcagtaccctgttctttacctgtgctgtggagggt
tcgccagagtacacagtggcttggtacaggaacacagaacctatagtcccagaccagcac
atctctatacagggctcccacaacgacaccctgcagatcacagccgctcagaagagccac
tctggggcctaccagtgctttgcctcccgcaagggccacaccgcccaggacttctctatc
atactgctggaggatggcactcctcgtatcgtgtcttccttcagtgagcgcgtggtcgcc
cccggtgagccattctccctgatgtgtgcctccaagggagccccacccccctccatcacc
tggacgctggacgacgagcctgtggtgcgagactccgcctacaagaccagccagtacacc
ctatcagacggcctgaccgtgtcacatgtcaacgtcagcagcccggccatccgtgacggg
ggagtgtatcgctgcgctgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggttctcctaggatcagggagatgcgtgacatcacggctgtggcaggaagg
aacacctttataacctgtcgtgtgattggttacccctactactctatcaagtggtttaag
gacggcatgctgctgcctgacaaccatcgccaggtggtgtatgagaatggaaccctgagg
ctgagtgatgtgcagaagggcatggacgagggtacctacctgtgtagtgtgctcatccag
ccacagacctccatcgaccagactgtccacgtcactgtcaaagtgccacccctgatccag
ccctttgatatcccctccacgtcggtgggaaagctgatgtacattgcctgcgtggtgtcg
tcaggtgacatgcccatccgcatcacctggcacaaagacgggcaactcatcgtgcctggt
tccgcctctggtgttggcatagagaccaaggaattcatgagctccttgcagatctccaag
gtgacgctgaagcacaacggcaactacacctgcatcgctagcaacgccgcggcaaccgtc
agctgggaaagacagctggtcgtcaccgttccccctcgcttcgtggtccagcccaacaac
caggatgggatctatgggaaggcaggagtactaaactgttctgtggagggatacccacct
cccaaagtcatgtggaaacacgccaaaggtatagggaacccccagcagtaccaccctgtg
cctctgactggtcggatccagatcatgttcaacggctccctgctgattcgccacgtccta
gaggacgaccggggatactacctctgtcaggcctccaatggagtgggctctgacatcagc
aagagcatggttctcaccgtcaagattccagccatgatcacgtcacaccctaacaccacc
atggccatcaagggccagatgaaggagctgaactgcacagcgcggggcgagcagcccatc
atcatccgctgggagaggggcgacactgtcatcgatgccgagaggaacccccgctactcc
atcaccatcaacaagaagggggacgaggttatctccacactcaagctgaagccagcggag
cgcggggactcagtcttcttctcctgccatgccatcaactcatacggagaggggcgagga
ctcatccagcttactgtgcaagagcctcctgaccctcctgagttggaggtgagagaggtg
aaggaccgcagtatgaacctgcgctggatccagaggttcgatggcaacagcatcatcacc
agctacgacatcgagtataagaacaagtctgatacttgggatcacaagtacaccaccagg
aacatctcccccactaacaaccaggctaacatcgtggagctgcaccctgcctgtgtctac
agcatccgcatgtactccttcaacaagatcggacgcagccagcctagcaaggagctcacc
atcagcactgaggaagcacaacctgatgggccccctatggaagtgatcctccaaccaatg
acgtctcagagcatacgggtcacatggagggcccccagaaaggagcttcagaacgggttg
atccgggggtaccagatcggttaccgtgagaacgggccgggcagtaacggccaatacagc
attgtggagatgaaggccacaggggacagtgaggtgtacaccctggacaacctgaagaag
tttgcccagtatggagtggtggtccaggccttcaacagggctggcactggtccctctagc
actgagatcaacgctaccacactggaggatgtgcccagccagccgccccagaacgtgcgg
gctatctcggtgacctcagacgaggcggtgatcacgtgggcggagccaccgcgtctgacg
ctgcatggcgtgttgaagggctaccgcgtggtgttctggtccctcttccctgacggagaa
tggggagagatgcaaaacatcactacaactcgtgagcaggtggagctgagagggctggag
aagtttactaactacagtgtccaggtgctggcctacacacaggctggggacggggtcagg
agcaatgtcctgtacatccaaacccgcgaggaccgtgattctaaactccttagttctctt
tcaagtcatctgggcttccctcatgccattagaccatatatgccaagcagcccctccaaa
gtgctactgtaccattataccatggtattacacagtgttaataatcggacctgtatctct
ctcccccaggctcccagtgagtatgaggccaacccagagatgttgttctacaggatcacc
catctgacccgcggtaaacagtacctcatctgggcctccgccgtgacaactgctggccgc
ggcaacatcagtgaaaaggtcaccgtggagcctgctgggaaagccccagctaagatcctg
tcgttcgggggcacagtgactactccctgggtgaaggaggtccgtctgccctgcagctca
gtgggagaacccacccccaccatcaaatggaccaaagacagtgaggactcgactatccct
gtgactgtggatgggcagcgtcagatcctgtccaacggtactctggtgttacgttctgtc
aaagctgaggattctgggtactacacgtgcacggccaccaacaccctgggctttgacacc
atcatagtaaacctactggtgcaagttcctccagaccagccccgtctgaccgtctccacc
acctccacctcttccatcaccctggcctggatccctggggacaacggaggcagctccatc
agaggtttcgtcctgcagtactcagtggacaacacagaggagtggagggatgtgttcatt
agttccagtgagcgttccttcaggctggacaacctgcgctgtgggacctggtacaaggtc
aaattggcagccaagaacagtgtgggctcaggacgcatctctgagatcatcgaggctaag
acccacggacgagagcccgtgttcaacaaggagcagcccctgctcacccacatcaactcc
acccacgcggggctcaacctgcagggctggaccagcggcggctgccccatcaccgctctg
ctgctggacttccggcccaagggcacgtgggcctggcagagcctgaaggccaacgccacg
gcccagctattcctcagcgagctgcgggaggccacctggtacgagctgaagatgaaggcc
tgtaatagcgccggctgtgggaaccaaagctcccagtttgccaccacagactatgacggc
agtaccatccctcctataagctcggcccatgaggacagagatgatgtgaagaagctgttc
tccatcggttctcctgtcatcctggtcaccctgggcgtcgccctgctcttcatcatccgc
aagaaacgcaaagagaagagactcaaacgactcagagatgctaagagccttgcagagatg
cttatcagtaagaacaaccgcagcatggacaccccagtgaagggtcctccccagggcccc
cggctccacatcgacatccctcgtgtccagctgctcatcgaggacaaggagggcatcaag
cagataggtgaggacaaggcagtggccccagtgacggacacagagttcagccaatcagtg
aatccacagagcttctgcacgggtgtgtctctgcaccatcctgccctcatccagaacaca
gggcccttgattgacatgtcagacatccgccccggaaccaatccagtgtcgaggaagtgt
gtgaagtcagcccacagctccagaaaccgctactccagccagtggaccctgagcaggccg
ggccagagccaatcaacagcctccgcaaggactctgacctctgactggcgcaccatgggc
tcccacggcatcaccgctaccgagagtgacagctacagcgccagcctgtcccaggatact
gacaagggtcgtaacagcatggtgtccacagagagtgcgtcgtctacgtatgaggagctg
gcgcgggcctacgaacacgccaaactggaggagcacctgcagcatgccaagttcaccatc
acagagtgcttcatctccgacagctcctctgaccagatgaccacaggcaccaacgacccg
gccgacagcatgacatcactcagcaccccatccgagacaggcctgtgtcgcttcaccgcc
tcgccacccaaaccccaggactacgaccgcggcagacctaccaacgttgccgtgcccatc
ccccaccgtgccaacaagagtgaattctgcaacctcccgctctacatgaagacggatcct
ttcttccggaagcaggcagaactgcatgacccatgccctgcggtcccgcccagggaggcc
tccatccgcagcctggcacagcgggcgtaccacacccaaggacgtcatatgactctggac
ccgtccaagcaacaggccctgacgctaggccactctgggttgggcagtctgggcatgagc
tcaggcactgccaccctgccccagaggactctcaccatgccctgctccaaccctgcagcc
acagcctccacttccagcaccagcagcaaccccactggctccagcacaaagatggggggc
tccagagactcactgctagagaatagctcctcagcgctgggcagactgcagaagcaaggg
gtcggggcctactctaagtcttacacactggtgtag
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