Oncorhynchus nerka (sockeye salmon): 115104831
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Entry
115104831 CDS
T07952
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115104831
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
115104831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Motif
Other DBs
NCBI-GeneID:
115104831
NCBI-ProteinID:
XP_029482017
LinkDB
All DBs
Position
LG22:73411216..73518477
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AA seq
1401 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSEEEPFHVQPSSQRFYFAVLSETQLSVWFSRPSVLIVSYIESAK
ASSQFGFYQQAEWKQDDSMIAVAAANGYILLFDVVGGGEDKYLYEPVYSKGSRGVKVTPG
YKEEQCAPALSLEMKRPIDLEAPITSMQSLQEDLLVSTADGYLHVLHWNGVSNGRKAISL
CSVPFSLDLQSARGGLCLDLKGVYIRDMTYCVTLDGFAVVLDDGRLGFITPLANRITADQ
LQGVWAADVTDGTCVAVNNKYRLVTFGCASSSSSSSSDVCNKTGAVKLIRWSPDYSVAMV
TWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPINISSMCWGAEGYHLWVITSREEA
ELVENMEEAPPQTQQAGILQFNFIKSALTVNPCTSNQEQVLLHGEDRLYLTCGDPTQLSS
GSSESPHPHNLPHGGEGSPTHHPSPNSTLLGYKHWHVVQIHSTYLESNWPIRFAAIDTAG
QCIAVAGRRGFAHYCMSTRKWKLFGNITQEQNMTVTGGLVWWNGFVVVACYNFIDRQEEL
RLYLRSSNLDNTFSSVTKLHSDTLLLNVFRDMIILFRADCSICLYSMERRHDGPNPSASV
ELLQEVSMSRYIPHPALVVSVTLTSVRTETGITLKAPQQACMADSIILNLAGQLIMLQRD
RSGPQLQEKLPFCPPVVLAQYVENVWTTCRSNRKKRHLLEALWLSCGEAGMKVWLPLFPR
DHRKPHSFLSRRIMLPFHINIYPLAVLFEDALVLGASNETVVYDSLQGPREGRESLEGLF
PYCTVERTSQIYLHHILRQLLVRNLGEQALLLAQSCAALPYFPHVMELMVHVVLEEEATS
REPIPDPLLPTVAKFITEFPLFLQTIVHCARKTEFALWNYLFAAVGNPKDLFEECLMAQD
LDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMIRFLKAIGSGEMETPPP
TPTTQEPSSTGGFEFFRNRSISLSPSADSIAAGKFNLQKTFSMPSGPSAKGSERWSKDSD
CAENMYIDMMLRRHARHLLEHIRLKELGCFSAQLGFELISWLCHERTRVARVDDFVMALK
CLHKDFLWPFPVTPAGSISSPFKNGHRRTVLSQHLLKSQSADSLLNSDMDTAPPQAAARN
SNHTWLDGLGALGPTEPTEMDTALSHGGPQTQEAFLSPLTNKTEECSIGSATDLTETSSM
VDGDWTMVDENFSALSLTPSELEHISMELANKGPHKSQVQLRYLLHVFMEAGCLEWCVVI
GLILREATVIKQVVNFLDSPEVPHETVQSVRSGLLGVDAWASTDCLGYKPFLNMIRPQLQ
KLIETSVEQIQPEAFLPGASNSKLAEPQPGGPSAEDSRGPALLGLALPLEPPGGLGTEDG
GVPEEQEEQAVDEGVYDCTLS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctaactggctggcctcggaggctactttgtccactgaaaagtgaagaagaa
ccgtttcatgttcaacccagctcccagaggttttacttcgctgtattgtccgagactcaa
ctaagcgtctggtttagtcggcccagtgttctgatagtgagctacatagagtcggcgaaa
gcatcatcccagtttggcttctatcagcaggccgaatggaagcaggacgattccatgata
gcagtagcggctgccaatggctacatcctcctgtttgacgtggtgggaggaggagaggac
aagtatctttatgaacccgtctattccaaagggagtcgtggtgttaaggtcaccccaggt
tataaagaggagcagtgtgcccccgctctcagcctggagatgaagagacccatagacctg
gaggctcccattaccagcatgcagtctcttcaggaggatctattggtgtctactgctgat
ggctacctccacgtcctccactggaatggagtcagcaacggcaggaaggccatcagtctc
tgtagtgtccctttctccctggacctacagtctgccagaggtggtctgtgtctggacctg
aagggggtgtacatcagagacatgacctactgtgtgacactggatggctttgctgtggtg
cttgatgatggcaggctggggttcatcactcctctagccaacaggatcactgcagatcag
ctgcagggcgtctgggcagcagatgtaacagacggcacgtgtgtggctgtcaacaataag
tacagactggtgacctttggctgtgccagttcctcctcctcctcctcctcagacgtgtgt
aacaagacaggcgcggtgaagctgatccgctggtcccctgactacagtgttgccatggtg
acctgggagtgcgggggactgtctctgtggagtgtgttcggagcccacctcatctgtacc
ctgggggaggactttgcgtatcggtcagacggcactaaaaaggaccctataaatatcagc
tcaatgtgctggggagcagagggctaccacctgtgggtcatcaccagcagagaggaggcg
gagctagtagagaacatggaggaggctcctccccagacccagcaggctggcatactgcag
ttcaacttcatcaagagcgccctcacggtcaacccctgcacgagtaaccaggagcaggtg
ttacttcacggggaggaccgtctctacctaacctgtggtgaccccacccagctctcctcc
ggcagctcagagagcccccacccccataacctcccccacggcggggagggcagccccacc
caccacccctcgcccaactctactttactgggatacaagcactggcacgtggtccagatt
cacagcacatacctagagagcaactggcctatacggtttgcagccatagacacagcaggc
cagtgtatagctgtagcagggagacgtggctttgcacattactgcatgtccaccaggaaa
tggaagctgtttgggaacatcactcaggagcagaacatgaccgtgacgggagggctggtc
tggtggaacggctttgttgttgttgcctgttacaatttcatcgaccggcaagaagagctg
cgtctgtacctgcggtcgtctaacctggataacaccttctcctccgtcaccaagctgcac
tctgacactctgctgctcaacgtgttcagagacatgatcatcctcttcagagcagactgc
tccatctgcctctacagcatggagaggagacatgacgggcccaatccatcagccagtgtt
gagctgcttcaggaggtgtccatgtctcgctacattcctcatcctgccctggtggtgtca
gtcaccctcacctccgtacgcacagagaccggcatcacgctcaaagccccacagcaggcc
tgtatggcagacagcatcatactgaacctggcaggccagctcatcatgctacagagagac
cgttctggaccccagctacaggagaagctgccgttctgtcctccagtggttctggcccag
tatgtagagaatgtgtggacgacgtgtcgtagtaacagaaagaagcgtcacctactggag
gctctgtggctgtcgtgtggagaggctgggatgaaggtgtggctccccctgttccctcgt
gaccatcgtaagccccactccttcctgtcccgccgcatcatgctgcccttccacatcaac
atctatcccctggctgtgctgtttgaagatgctctggttctgggagcttccaacgagact
gtggtctatgacagcctgcagggtcccagagagggccgggagtccctagaggggttgttc
ccctactgcacggtggagaggacatcccagatctacctccaccacatcctgaggcaactc
ctggtccgtaacctgggggagcaggcccttctcctggcccagtcctgcgcagcgctcccc
tacttcccccacgtcatggagctcatggtccacgtggtgctggaggaggaggccacctcc
cgggagcccatccctgacccgctgctgcccaccgtggccaagttcatcacagagtttccc
ctgttcctccagaccatcgtgcactgcgccaggaagacagagtttgccctgtggaactac
ctgtttgctgccgtgggcaaccccaaggatctgtttgaggaatgtctgatggcccaggac
ctggacaccgctgcatcctatctcattatactacagaacatggaggttccagcagtgagc
aggcaacacgctacactactcttcaacacggctctggagcagggcaagtgggacctctgt
cgtcacatgatccgattcctcaaggccattggctctggagagatggagaccccaccccca
acaccaaccactcaggaacccagttcgacgggaggttttgagttcttcaggaatcgcagc
atcagtctgtctccgtcagctgacagcatcgctgctgggaagtttaacctacagaagacc
ttcagcatgccctctgggccctctgctaaggggtctgagaggtggtctaaggacagtgac
tgtgcagagaacatgtacatagacatgatgttgaggcgtcacgcccgccacctccttgag
cacatcagactgaaagagctgggttgtttctctgcccagctgggcttcgagctgattagc
tggctgtgccacgagcgcacgcgggtggcgcgggttgatgattttgtcatggcgctgaag
tgtctccacaaggacttcctgtggccgtttcctgtcaccccagccggctccatcagctcg
cctttcaagaacggacaccgcaggacagtgctgagccagcatctactgaagtcccagtca
gcagacagcctgttgaacagtgacatggacacagcgcccccgcaggccgcagcacgcaac
agcaaccacacctggctagacgggctgggggctcttggacctacagagcctacagagatg
gacactgccttgtcccacggggggccacagacacaggaggccttcctctctccactaacc
aacaaaacggaggagtgcagtatcggttctgccacagacctgacagagaccagcagtatg
gtggatggagactggaccatggtggatgagaacttctctgctctcagtctgaccccctct
gagctggaacacatctccatggagctggctaacaagggaccacacaagtcccaggtccag
ctacggtacctcctgcatgtgttcatggaggctggctgtctggagtggtgtgttgtgatt
ggtctgatcctgagagaggccacagtcatcaaacaggtggtcaacttcctggacagcccc
gaggttcctcatgagaccgtccagagtgtgcgctccgggctgctaggggtcgacgcatgg
gcctccactgactgcctgggctataagcccttcctgaacatgatccggccccagctacag
aagctcatagagacttctgtagagcagatccagcctgaagccttcctgccaggggcttcc
aactcgaagctggctgagccccagcccggaggccccagtgcggaagacagtagggggcct
gctctcctgggtctggcccttcctttggagccccctggggggttagggacagaggacggt
ggagttccagaggagcaggaggaacaggcggtggacgagggggtgtacgactgcactctg
tcctga
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