KEGG   Oncorhynchus nerka (sockeye salmon): 115104860
Entry
115104860         CDS       T07952                                 
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03030  DNA replication
one03410  Base excision repair
one03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115104860 (fen1)
   03410 Base excision repair
    115104860 (fen1)
   03450 Non-homologous end-joining
    115104860 (fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:one03032]
    115104860 (fen1)
   03400 DNA repair and recombination proteins [BR:one03400]
    115104860 (fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115104860 (fen1)
DNA replication proteins [BR:one03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    115104860 (fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     115104860 (fen1)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     115104860 (fen1)
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115104860 (fen1)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 115104860
NCBI-ProteinID: XP_029482064
LinkDB
Position
LG22:complement(1503955..1509085)
AA seq 380 aa
MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTGVLLRHLTASEAKKLPIQEFLFSRLLQDINLTHEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGSIEEILENIDPSKHPAPEDWLYKEARGLFLQPDVVDCSTVDLKWSE
PNEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETK
GSNKKKQKTGATPGKFKKGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaagaa
caagacatcaagaactactttgggcggaagatcgcaatagacgcctccatgtgtatgtat
cagttccttgtcgctgttagacaggatggtaatgtgctacaaaacgaggatggagagacc
acaagccatctcatgggcatgttctaccgaactatccgcatgctggagcacggcatcaag
cctgtctatgtgtttgatggcaagcccccacagctgaagtcaggagagctggagaagaga
ggagagaggagggctgaggctgagaaactgctggcacaggcacaggaagcaggggagcag
gagaacattgataagttcagtaaacgtctggtgaaagtcacccggcaacacaacgacgaa
tgcaagaagctgctcaccctgatgggggtgccatacatcgaggctccgtgtgaggctgag
gcgagctgcgctgctctggttaaggctgggaaggtgtttgccactgcaacagaggatatg
gacggtctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaa
aagcttcctatccaggagttcctgttcagtcgccttctgcaggacattaatctgacccat
gagcagttcatagacctgtgcatactgctgggctgtgactactgtggtactatcaaggga
atcgggcccaagagagccattgacttgatcagacaacacggctccatcgaggagattctg
gagaacatcgacccgtctaagcaccctgccccagaggactggctgtataaggaagccaga
gggctgttcctgcagcctgacgtggtggactgctccaccgtagacctcaagtggagcgag
cctaacgaggatgccctcatccagttcatgtgtgcagagaaacagttcagtgaggaccgc
atcaagaacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactg
gacaccttcttcaccatcaccgggtctctgtcatcaaaacgcaaggaacctgagacaaag
ggatccaacaagaagaaacagaagaccggtgcaaccccaggcaaatttaagaagggaaaa
tag

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