Oncorhynchus nerka (sockeye salmon): 115104860
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Entry
115104860 CDS
T07952
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03030
DNA replication
one03410
Base excision repair
one03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115104860 (fen1)
03410 Base excision repair
115104860 (fen1)
03450 Non-homologous end-joining
115104860 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115104860 (fen1)
03400 DNA repair and recombination proteins [BR:
one03400
]
115104860 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115104860 (fen1)
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
115104860 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
115104860 (fen1)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
115104860 (fen1)
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115104860 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
115104860
NCBI-ProteinID:
XP_029482064
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All DBs
Position
LG22:complement(1503955..1509085)
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AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTGVLLRHLTASEAKKLPIQEFLFSRLLQDINLTHEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGSIEEILENIDPSKHPAPEDWLYKEARGLFLQPDVVDCSTVDLKWSE
PNEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETK
GSNKKKQKTGATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaagaa
caagacatcaagaactactttgggcggaagatcgcaatagacgcctccatgtgtatgtat
cagttccttgtcgctgttagacaggatggtaatgtgctacaaaacgaggatggagagacc
acaagccatctcatgggcatgttctaccgaactatccgcatgctggagcacggcatcaag
cctgtctatgtgtttgatggcaagcccccacagctgaagtcaggagagctggagaagaga
ggagagaggagggctgaggctgagaaactgctggcacaggcacaggaagcaggggagcag
gagaacattgataagttcagtaaacgtctggtgaaagtcacccggcaacacaacgacgaa
tgcaagaagctgctcaccctgatgggggtgccatacatcgaggctccgtgtgaggctgag
gcgagctgcgctgctctggttaaggctgggaaggtgtttgccactgcaacagaggatatg
gacggtctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaa
aagcttcctatccaggagttcctgttcagtcgccttctgcaggacattaatctgacccat
gagcagttcatagacctgtgcatactgctgggctgtgactactgtggtactatcaaggga
atcgggcccaagagagccattgacttgatcagacaacacggctccatcgaggagattctg
gagaacatcgacccgtctaagcaccctgccccagaggactggctgtataaggaagccaga
gggctgttcctgcagcctgacgtggtggactgctccaccgtagacctcaagtggagcgag
cctaacgaggatgccctcatccagttcatgtgtgcagagaaacagttcagtgaggaccgc
atcaagaacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactg
gacaccttcttcaccatcaccgggtctctgtcatcaaaacgcaaggaacctgagacaaag
ggatccaacaagaagaaacagaagaccggtgcaaccccaggcaaatttaagaagggaaaa
tag
DBGET
integrated database retrieval system