Oncorhynchus nerka (sockeye salmon): 115104875
Help
Entry
115104875 CDS
T07952
Name
(RefSeq) laminin subunit alpha-1-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115104875
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115104875
09142 Cell motility
04820 Cytoskeleton in muscle cells
115104875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
ARA70
Motif
Other DBs
NCBI-GeneID:
115104875
NCBI-ProteinID:
XP_029482102
EnsemblRapid:
ENSONEG00000019580
LinkDB
All DBs
Position
LG22:complement(2686699..2763031)
Genome browser
AA seq
3085 aa
AA seq
DB search
MRLLCCAIVLLSASSAECQQRGLFPAIFNLASNAEITTNATCGEPEPEMYCKLVEHVPGR
RIRNSQCRTCNAQSQNPKEQHPITNAIDGTNGWWQSPSIKNGRQFHWVTLTLDLHQIFQV
AYVIIKAANSPRPGNWVLERSMDGVDYTPWQYYAISDTECLTRYNITPRLGPPTYKRDDE
VICTSYYSRLVPLEHGEIHTSLINGRPSSDQLTSELLDFTSARYIRLRLQRIRTLNADLM
TLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAKKLQCVCEHNTCGE
SCNECCPGYHQEPWQPGTLSDGNTCEKCNCHDKANDCYFNQTVANRKMSMNSHGDFHGGG
VCISCTQNTAGVNCEACADGFYRPNKVSPHNENPCVECSCDMKGSLTPACIRDDNHAKPE
NGLNPGQCLCMEGFAGERCDRCAFGYRDFPLCSRCECSLEGSLNIDPCTECICKENVMGA
DCDLCKQGFFNLEGSDPEGCTECFCFGVSDVCESSPWSMSQTVHSNGWLLTSESVSVYTA
SLIEEDNNLIIPNITMIQSYRFVSTWAAPESFLGKRLTSYGGFLSYSVAYDVSVDNVDRS
LPSQFDLIIEGNGRTLRQMPPRQLLLTPLNEQHVSVELLPQGFVDLHTGQRVDRDELMTA
LADVAGLRIRGHLNASAEGELRLSTVSLDMVDINSTNTVQARDVEQCECPLGYSGTSCES
CSSGFYRLGGILFGGNCLQCECNNHATECDINRVCLDCTHNTTGPHCDQCLHGYYGNPSE
GTPEDCQRCACPLTVATNNFSPTCLLEGPGQVTCDRCQQGYTGTKCERCANGYHGDPTVA
GQECVVCECNGNVDPWEPGHCDTSSGMCLKCHSHTSGDQCERCEDGYYGDAITAKNCQAC
GCHEKGSYSGVCDLLTGQCTCKPNVVGEKCDQCQVGFHGLLSGQGCRECDCIQSGSVSVA
CEEDGRCQCIPGVAGDKCDRCHHSYFNYQGSGCIQCECAHTYGNCNVTTGECICPPHTRG
EKCDLCEEGHWGHNTVTGCKSCNCSEMGSYATQCGITNGQCQCRSDFAGQNCDHCAMGYR
GYPECTVCNCNINGTREEFCDEELGVCSCEAPGNCVCKDNVGGGGCDECKTGTLGLSVSN
PAGCSPCFCFGVSSDCEELGGMVRVPITLGSDPELLRVVSQSDLQGSVVGVYYQNPDMLL
DTRDIETPSLAGPYYWRLPKHYQGNKLLSYGGKLSYVVAFYAMDGAGLANYEPQVLMRGG
HLGKQVIYIDMPAPDNGVTTRQDVPLTEHKWKYFNSVSEKAVSHSDFMAVLSHIEYITIK
ASYGTGLQQSRISNITMDTALEAEQGLEDMELASLIEICDCPAGYAGLSCQECAPGYYRQ
PVTELNKRGKRPLIQPCVPCRCNNHSQACDLDTGECLGCQHNTAGEHCSVCSSGYYGDVK
GSVRDCSLCACPLKENSFSPTCALEGVVGDFRCNACKPGYEGRYCERCSVGYYGNPSGPG
GRCEACQCSTAGSLHPACDSLTGQCECKAGVRGRLCDQCEARHVLDGDQCVLCDDECTRV
LLDDLDAVECSFLSVNLTGVILSPYSTLVNLENDTREVKTLMSSYRSPDYHLTRDEEDMT
NLTQDIDGLLQKAMGVSADGEEVARSTENSVTQGAELLEYINTIQTAIQALAEQAGRLIR
TDNVEMNEAKSRRLMKQVAAMLETIRVVDLAQANASVSTELWAAEALLQRVQKHLQEPQG
VIESQTLNISSSLTQHQQQLVDAQALLNTARENNNHTQTLLGSINTNLPQYQGLRQNVGR
LNQTAETQLEETQDILADAVNLAEDMSNGTSQLEGAKEQLEQWNPMLRKHVDALVMELRK
QEALELVYKAEDHAQELSKKAQALQSSLAEVMNTTLKATSAAHANSNIRVNIQPAEEMAN
RAILTAAMALNMTAQQEVSLTDLGSEAVQCSAKILAECLALNNSTGGLLATISDVTDRMA
LLINNLHNTRRRIPEPAFLLHSRPNGTSEQVLEAKEQAAMANSSLQRALEHLEELRVRLE
ESSKAVAQAKTSVSNTNQLFSDSHSTARTAESKLNEAESRTERLYDRLKPLKTLRENLSR
NLSEIREMINQARKQAASIKVSVLADKDCVRAYKPEMSSSNFNTLTMTVKTSEPDNLLFY
MGSSSSVDFLAVEMHRGKVGFLWDAGSGHAKLEYPDIQINNNKWHRINATRFGRHGTLSV
HQLESDPLPAVKTTSPRPATVLDVNKFTLIFVGGLGGQIKKSSAVKMTQFKGCVGEASLN
EKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPLRSTSTSIVLLFKTLSP
NGLLLYLASNATRDFLSIELVEGQVHLTFELGSGPLTLSSNKAYNTGSWYKITLQRNKRK
VYISVMAADNSSDKEIIEAESPGSASDLNRSDLDPIYIGGLPMSRPIRRQVVARSYVGCI
KNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLRGGYVELPSMSLGSQGELLASFSTRN
HTGIILAGFSKAGTRKRRQARQPILAVMLVSGHLEVHVNMVEGGSVHKVVVKSRSGSFSD
GQEHSVILQRNRKTMTVLVDEDHQETVRLSSEKASLTFASLYMGGLPPEEGVGLLRTTSS
FYGCIRNLALDAKLLDLSAAVKYHNVDMDSCLLEERPKRVLLPDDTDLEAEPTLDPSRPH
PPPPTQLSALTPGTLTCASMDNSTSLPEANQFGISRHSHKVLNINPNTVRRSFSLELSVR
TFAQSGLIYYMAHANQMDYTTLQLLGGRLFFTCDKGSGPATASFPVPVNDGRWHTVKTDF
NKKSVIISVDSQASAPVLAKGNTLDVENKLYLGGLPHTYTAKKIGNVTHSLAGCIQKVIL
NSVELDTQSPVSEHSTAHCFTAAQDGTFFSGSGYAALMKEGYKVGSDVTVALEFRSTAPD
GVLLGVSSAKVDAIGLELASGQAVFHVNNGAGRVSATSRLGRWLCDGRWHTLLAKKTKNA
LSLSVDGVTVLTDNPHPQSTSAETKDPIYVGGFPVGVKQNCLTSRSSFRGCMRNIRLIKG
HVIDILDFSTAFTLQGVSPHSCPAT
NT seq
9258 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttatgctgtgcaattgtgctgctatctgcatcctccgcggagtgccagcaa
agaggtctcttccccgccatcttcaacctggccagtaatgcagagatcaccaccaacgcc
acctgtggagagcctgagccagagatgtactgtaaactggtggaacacgtaccaggacga
cgcatccgcaactcccagtgtcggacctgtaacgcccagagtcaaaaccccaaagagcaa
catccaatcaccaacgccattgacggcaccaacgggtggtggcaaagccccagcattaaa
aatggcagacagttccactgggtgaccctcacactagacttacaccagattttccaggtg
gcctatgtcatcatcaaggcagccaactctcctcgtcctggtaactgggtgctggagcgt
tcaatggacggtgtggattacacaccctggcagtactacgccatcagcgacaccgaatgt
ctgacccgttacaacatcaccccccgcctcggaccccccacctacaaacgagacgacgag
gttatctgtacatcttactactcgcggctcgtacccctggagcacggagagatccacacg
tctttgatcaatgggcggcccagttctgaccaactgacctcagagttgctggacttcacc
tcagcccgctacatccgcctgcgtctgcagagaatccgcacgctcaacgccgacctcatg
accctgagctaccgcgaccccaaggaggtggaccccatcgtcaccagacggtactactat
tcaatcaaagacatttcagtgggtgggatgtgcatctgttacggacacgcccagagctgt
ccctgggaccccgttgccaagaagttgcagtgtgtatgtgagcacaatacctgtggggag
agctgtaatgagtgttgccctggctaccaccaggaaccgtggcaaccgggaaccctctcc
gatggcaacacctgcgagaaatgtaactgccacgacaaggccaacgactgctactttaac
cagacggtggccaaccgcaagatgagcatgaactcacatggtgacttccatggcgggggc
gtttgtatcagctgtacccagaacacggccggtgtcaactgtgaggcctgcgcagatggc
ttctacagacccaacaaggtgtctccgcacaatgagaacccatgtgtggagtgcagctgt
gacatgaaggggtctttgactcctgcctgtatcagagatgacaaccacgccaagcctgag
aatggtctgaacccaggccagtgtctgtgtatggagggctttgcgggcgagcgctgtgac
cgctgtgcctttggctacagggacttccccctgtgttcacgctgtgagtgcagtctggag
ggcagcctcaacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggggcc
gactgtgacctgtgtaagcagggtttcttcaacctggagggcagtgacccagagggctgc
actgagtgtttctgcttcggtgtgtctgacgtgtgtgagagctcaccctggtctatgtct
cagacagtgcactccaatggatggctccttacctctgaaagcgtctctgtctacacggca
tccctcatagaggaagacaacaacctcatcatcccaaacatcaccatgatccaatcgtac
cgttttgtttctacatgggccgccccagagtccttcctggggaaaaggctgacatcgtac
ggaggatttttgagctacagcgtggcatatgatgtttcagtggacaacgtggacaggtct
ctgccgtcacagtttgatttgattatcgagggtaatgggaggaccctgcgtcagatgccc
cccaggcagctcttgttgacgcccctgaacgagcagcatgtttctgtggagctcttgcca
cagggcttcgtagacctgcacacaggtcagagggtggacagggacgagctgatgactgca
ctggccgacgtggccgggctgaggatcagaggtcacctcaatgccagtgcagagggggaa
ctcagattgagcactgtatctctggacatggtagacatcaattctactaacacagtccag
gcccgggacgtggagcagtgtgagtgtcccttgggctactctggcacatcctgtgagtcc
tgttcatctgggttctatcgcctcggggggatcctgttcggaggcaactgtctccagtgt
gagtgtaacaaccatgctacggaatgtgacatcaacagagtgtgtctggactgtactcac
aataccactgggccccactgtgaccaatgcctccacggttactatgggaacccctctgag
ggcaccccggaggactgccagagatgcgcttgcccgctgacagtggcaacgaacaatttc
agccccacctgtctcctggagggccctgggcaggtgacatgtgaccggtgtcagcagggt
tacactgggactaagtgtgagaggtgtgctaacggttaccacggcgacccgacggtggca
ggccaggagtgcgtggtgtgtgagtgtaacggtaacgtggacccctgggagccgggccac
tgtgacaccagcagcggtatgtgtctgaagtgtcacagccacaccagtggagaccagtgt
gagaggtgtgaggacggctactacggtgacgccatcaccgccaagaactgccaggcttgt
ggttgccatgaaaaagggtcgtactcgggagtgtgtgacctgctcactggacagtgtacc
tgcaaacccaacgtggtgggagagaagtgtgaccagtgtcaggtgggcttccacggtctt
ctcagcggacaggggtgcagagaatgtgactgtatccagtcaggatctgtgtccgtggcc
tgtgaggaagatgggaggtgccaatgcatcccaggggtggcgggggacaagtgtgaccgc
tgtcatcacagttactttaactaccagggcagcggctgtatacagtgtgagtgtgcccac
acctatggcaactgtaacgtgacgacaggcgagtgtatctgtcctccccacaccagagga
gagaagtgtgatctgtgtgaggaaggtcactggggtcacaacactgtgacaggatgtaag
tcatgtaactgcagtgagatgggcagctatgccacccagtgtggcatcaccaacgggcag
tgccaatgccgctctgatttcgctgggcagaactgtgaccactgtgccatgggctacagg
ggctacccagaatgcacggtgtgcaactgcaacatcaacggcaccagagaggagttctgt
gatgaggaactgggtgtgtgcagctgtgaggccccagggaactgtgtgtgcaaggacaat
gtgggtggaggtggctgtgatgagtgtaagacgggaaccttgggcctatctgtttctaac
ccggccggctgcagcccctgcttctgtttcggggtctcctcagactgtgaggagctgggt
gggatggtccgggtgccgatcacactgggttctgacccagagctgctacgtgtggtcagt
cagagtgacctccagggcagtgtagtgggggtctactaccagaacccagacatgctgcta
gacactagggacatagagacccccagcctggctggaccctactactggaggctgcctaaa
cactaccagggaaacaagttgttgtcgtatggagggaagctatcctacgtggtggcgttc
tatgctatggacggggccggcctggccaactacgagcctcaggtcctgatgagggggggt
catctggggaagcaggtcatctacatagacatgcctgcccctgacaacggggtaacaacc
cgtcaggacgtcccactgactgagcacaagtggaagtatttcaactctgtgtcagagaaa
gctgtgagtcactctgacttcatggcagtcctgagccacattgagtacatcaccatcaag
gcatcgtatggtacagggctgcagcagagcagaatatccaatatcactatggatacggcc
ctagaggcagagcaagggttggaggatatggagttggcgagtctgatcgagatctgtgac
tgtccagctggctacgctggactgtcctgccaggagtgtgccccgggctactaccgccaa
ccagtgactgagctgaacaagcgggggaagagacccctgatccagccatgtgtgccctgc
cgttgtaacaaccacagccaggcctgtgacctggacacgggagaatgtctgggctgccaa
cacaacacagcaggggagcactgtagcgtgtgttcctcggggtactatggcgacgtgaaa
ggctccgtcagggactgctcgctatgtgcctgccccctcaaagagaacagcttcagtcct
acctgtgctctagagggagtggtgggagacttccgctgcaacgcctgcaagcccggctat
gaggggcgctactgtgagaggtgttcagtgggttactatgggaacccgtctggtccagga
gggaggtgtgaggcttgtcagtgtagtactgcaggttctctccatccagcgtgtgactct
ctgacgggccagtgtgaatgtaaagccggggtcaggggacgcctgtgtgaccagtgcgag
gcgagacacgtcctggacggggaccagtgtgtcttgtgtgatgatgagtgtaccagggtg
ctcctggatgacctggatgcagtagagtgctccttcctgtctgtcaacctgaccggggtc
atcctgtcaccctacagcacactggtcaacttggagaacgacacgcgagaggtcaagact
ctgatgtcttcgtataggagcccagactatcacctgaccagggatgaggaggacatgaca
aacctcacccaggacatagacggactgctacagaaggctatgggtgtgtctgctgatgga
gaggaagtggcccggtccacagagaacagcgttacccagggggccgagcttctggagtac
atcaacaccattcagactgctatacaagccctggcggagcaagctggccgtctgatcagg
acagacaacgtggagatgaacgaggctaagagcagacggctaatgaagcaggtggcagcc
atgttggaaacaatcagagtggtcgacttagcccaggccaacgccagcgtctctacagaa
ctctgggctgccgaggctctcctccagagggtgcagaagcacctccaggagccccaggga
gtgatagagtcccagaccctcaacatctccagcagtctgacccaacaccaacagcagcta
gtggacgcccaggcccttctgaacactgccagggagaacaacaaccacacacagaccctg
ctgggcagcatcaacaccaatctgccacagtaccagggtctgaggcagaatgtgggccgg
ctgaaccagacggcagaaacacaactggaggagactcaggacatactggctgatgctgtc
aatctggcagaggacatgagcaacggcacctctcaactggagggggccaaggaacagctg
gagcagtggaaccccatgttgaggaagcatgtggatgctctggtgatggagctgaggaag
caagaggctctggagctggtctacaaggctgaggaccacgcccaagaactgagcaagaag
gcccaggctctgcagagttctctagcggaggtgatgaataccactctgaaagccaccagt
gcagcgcatgccaactctaacatcagagttaacatccagcctgcagaagagatggctaac
cgagccatcctgactgctgctatggccctcaacatgacggcccagcaagaggtgtcactt
actgatctgggatctgaggctgtgcagtgtagtgctaagatactggctgagtgtctggcc
ctgaacaacagcactgggggtctcctcgctaccatcagtgatgtgacagacagaatggcc
ttgttgataaataaccttcataacaccaggagacggatcccagagccagccttcctgctc
catagccggcccaacggcaccagtgagcaggtgctggaggccaaagagcaggctgccatg
gccaactcctccctgcagagggcactggagcacctggaggagctcagggtcagactggag
gagtccagcaaggcagtggcccaggccaaaaccagcgtctccaacacaaaccagctgttc
tctgactcacactcaaccgccaggactgctgagtctaagctgaatgaggcagagagtcgt
accgagaggctgtatgaccgtcttaaacccctgaagaccctacgggaaaacctgagcaga
aacctgtctgagatccgagagatgatcaaccaggcccgcaaacaggctgcctcgatcaag
gtgtcagtgctggcagacaaagactgtgtgagggcctacaagcctgagatgtcctccagt
aacttcaacactctaactatgaccgtcaagaccagcgagcctgacaacctgctcttctat
atgggcagcagctccagcgtggacttcctggcagtggagatgcatcgtggcaaggtgggg
ttcttgtgggatgcgggttcaggccacgccaaactggagtaccccgacatccagatcaac
aacaacaagtggcatcgcatcaacgccacacgctttgggaggcacggcacgctgtcagtc
caccagctggagtcagaccccctgcctgcggtcaagactacctcaccacgccctgctacg
gtcctggatgtcaacaagtttaccctcatatttgttggtggcctgggaggccagatcaag
aagtcctccgcagtgaagatgacccagttcaagggctgtgtgggggaggcgtcgctcaac
gagaagaacatcgggctgtggaactacgccgagagggagggccagtgtcgcggctgcttc
atgagtccgcagacggaggagacatccttccactttgatggcagtggttactcagtggta
gagaaacccctccgctccacctccacctccatcgtactgctgttcaagaccctctccccc
aacggcctgctgctctacctggcctccaatgccacgagggacttcctgtccattgagctg
gtggagggccaagtgcatctaacctttgaacttggctctggtcctctgaccctctcctcc
aacaaagcctataacactggcagctggtacaagatcaccctgcagaggaataaacgcaaa
gtttatatatctgtgatggctgcagacaactcatcagacaaagagattatagaggcagag
tctcctggctccgcctctgatctcaaccgctccgacctggacccaatctacatcggggga
ctgcccatgtctcgacctatcaggagacaagtagtagcacggtcctatgtgggctgcatc
aaaaacatggagatcgcccgctccaactttgaccttctccgagactcctatggtgtcaag
aaaggctgtgtgttagagccaatccgcagtgtgtctgtactgagagggggctatgtggag
ctgccatcaatgtctcttggctcccagggggagctgctggcctccttctccacccgcaac
cacactggcatcatcctggcaggcttcagcaaggcgggcacccgcaaacgcagacaggca
cgccagcccatcctggcggtcatgctggtgtcggggcacttggaggttcacgtcaacatg
gtggagggcgggagcgtccacaaggttgtggtcaaatcacgctctgggagcttcagtgac
ggacaggagcactctgtcatcctacagaggaacaggaagacgatgacggtactggtggat
gaggaccaccaggagacagtgcgcctgtcctcggagaaggcctctctgaccttcgcctct
ctgtacatgggtggcctcccgccagaagagggcgtcggactgctacgaaccacttcctcc
ttctacggctgcatcaggaacctggccctggatgccaagttgttggacctgtcagctgca
gtgaagtaccacaatgtggacatggacagctgtctattggaggagaggcctaagagggtc
ctactacctgatgacactgacctggaggccgagcccaccctggacccttccagaccccat
ccaccaccccccactcagctcagcgctctcacccccggcacgctcacgtgtgcatcgatg
gacaacagcacatccctcccagaggccaatcagtttggcatctccagacacagtcataag
gtcctcaacatcaaccccaacacagtgaggaggagtttctctctggagctgtctgtgcgt
acctttgcccagagtggtttgatctactacatggctcacgccaaccagatggactacacc
actctgcagctgctagggggtcgtctgttcttcacctgtgacaagggcagcggccccgcc
accgcctccttccctgtgccggtcaacgacggccggtggcacacagtgaagacagacttc
aataagaagagtgtgataatcagtgtagacagccaggcgtcagctccagtgctggctaaa
ggcaacactctggatgtggagaacaagctgtacctgggaggactgccccatacttacacc
gccaagaagataggcaacgtgacccacagcttggcgggctgcatccagaaggtgatcctg
aacagcgttgaacttgacacccagagtccagtgtctgaacactcgactgctcattgtttc
actgcagcccaggacgggaccttcttcagtgggagcggatatgctgctctgatgaaagag
gggtacaaggtgggctcagacgtgacggtggcgctggagttccgcagcacggcgcctgac
ggggtcctcctgggggtcagcagtgccaaggtggacgccatcggcctggagctagccagc
ggacaggcggtgttccacgtgaacaacggcgccgggcgggtgtcggccacgtcgaggctg
ggccggtggctgtgtgacggccgctggcacaccctgctggccaagaagaccaagaacgct
cttagtctgagcgtggacggggtcacggtgctcactgacaacccccacccccagtctacc
tccgctgagacgaaggacccaatctacgtgggaggcttccctgtcggagtgaaacagaac
tgcctgacttccagatcgtcattccgtggttgtatgcgtaacatccgcctgatcaagggc
cacgtgatcgacatcctggacttcagtaccgcattcaccctccaaggagtgtctccacac
tcctgccccgccacataa
DBGET
integrated database retrieval system
