Oncorhynchus nerka (sockeye salmon): 115104924
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Entry
115104924 CDS
T07952
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115104924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115104924
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115104924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
115104924
NCBI-ProteinID:
XP_029482197
LinkDB
All DBs
Position
LG22:6047440..6082861
Genome browser
AA seq
1484 aa
AA seq
DB search
MERERPRQHSQVTQEQEPDSPQLQQHVYLPAKGPPREANGPTTPSTPTPTSTPTTPTPTQ
GATEEEQGEHGMNDSEFSTAENHQTEAAAAQCAAQRDQETAVEEEEPNYEEKAQEIVQSI
LQEVVNTIVGGYCLNPAHLCSDAKEPASETKQPTEIMEPAEVITKVTEVTEVAEDEGALG
SDSENVHANGIPGTPISASFTPSLPDDRLSVCSNDTQESGATTGPVPGAKFSHILQKDAF
LVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPVFKTNEMFINAIKQY
LCVALSKNGVSSIPEVFSLSLSIFLTLLSHFKTHLKMQIEVFFKEIFLYILETSTSSYDH
KWMVIQTLTRICADAQGVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRAGHELGTTPLQ
ELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGRAGQEKPSEQETNETKAPETINR
YGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGVQYLQ
EQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYVDQMDFQGKDFVYAL
RTFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAYVLAYSIIMLTTDLHSP
QVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMKETKEMTLKSNKHSVAS
EKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVG
LQDCDDTEVAFLCLEGIRFAIRIACIFTIQLERDAYIQALARFTLLTASSGITEMKQKNI
DTIKTLITVAHTDGNYLGTSWHEIMKCISQLELAQLIGTGVKARYISGTVRGKEGFITST
KEQSNDEYLGLAGGTVDRKQILSIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVR
WLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNED
VAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVVRCIAQMVN
SQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHISTNVFEKHFPATIDSFQDAVK
CLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAFKDYTSDDMNVVPEDRVWVRGWFPI
LFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIVFRIFDNMKLPEQQT
EKAEWMTTTCNHALYAISDVFTQYFESLSDVLLDDILAQLYWCVQQDNEQLARSGTNCLE
NVVILNGEKFTPETWDKTCNCMLDIFKTTIPHALLTWRPAGAEGDPMTPQDISDRQLDSI
SQKSVDIQSHSEDQHSINSAERVAMETRRQSQYSTGIYEDGPRNRTPIKIQEQRLFSALL
IKCVVQLELIQTIDNMVFFPATSRKEDAENLAAAQVTAHSLCGG
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggagaggccccggcagcactcccaagtcacccaggaacaggaaccggactca
ccccagctccagcagcacgtctacctcccagccaagggccctccccgggaggccaacggc
cccaccaccccctctacacccacgcccacttccacccccaccactcctaccccaacccag
ggggccacggaggaggagcagggggaacatgggatgaatgactctgagttcagcacagca
gagaaccatcagacagaggcagcagcagcacagtgtgctgctcagcgtgaccaagagaca
gcagtagaagaggaggagcctaactatgaggagaaagcccaggagatcgtccagagcatc
ctacaggaagtcgtcaacaccatcgttggagggtactgcctgaaccctgctcatctgtgt
tcagatgccaaggagcctgctagcgagaccaagcagcccacagagattatggaacccgct
gaggtcatcaccaaggtaacagaggtcacagaggtggcggaagacgagggggcgctgggc
agcgacagcgagaatgtccatgccaacggaatccccggcacgcccatctctgccagcttc
accccgtcgctgcccgacgacaggctgtctgtctgctccaatgatacacaggagtcgggg
gcgaccacaggcccagtaccaggtgctaagttctcccatattctccagaaggatgccttc
ctagtgtttagatcgctctgcaagctgtctatgaagcctctgtcagatggaccgccagac
ccaaagtcccacgagctgcgctccaaggtgctatccctccagctgctgctgtccatcctg
cagaacgctgggcccgtcttcaagaccaacgagatgttcatcaacgccatcaagcagtac
ctgtgtgtggcgctgtctaagaacggcgtctcctccatcccagaggtcttctcgctctcg
ctctccatcttcctcaccctcctctcccacttcaagacccacctcaagatgcagattgag
gtgttcttcaaggagattttcctgtacattctggagacgtccacaagctcctacgaccat
aaatggatggtcatacagaccctcaccagaatatgtgcagatgcccagggtgtggtggat
atctatgtgaattatgattgtgacttgaatgctgctaatatctttgagaggctggtgaat
gacctctcgaagatcgcacagggccgggcaggccacgagctcggcacaacaccactccaa
gagttgaccctgaggaagaaaggcctggagtgtctggtgtccatcttaaagtgtatggta
gagtggagtaaagaccagtatgtcaaccccaactcccagaccagccttggaagagcaggt
caggagaagccctcggagcaggagaccaatgagacgaaggccccagagaccatcaaccgt
tacggaagcatcaactccctggactccacagcctcgtcgggcatcgggagctacagtaca
cagatgtcagggacagacaaccccgagcagtttgaggttctcaaacaacagaaggagatc
atcgagcagggcatcgacctgttcaacaagaaaccaaagaggggtgtccagtacctccag
gagcaaggtatgctgggaaccaccccggaggacctcgctcagttcctgcaccaggaggag
aggctggactcgactcaggtgggcgagttcctgggggacaatgatcgcttcaataaagag
gtcatgtatgcctacgtggaccagatggacttccaaggcaaggactttgtctacgctctc
agaacgttcctcgagggcttccgtctcccgggagaggctcagaagattgacaggctcatg
gagaaattcgctgcgagatacctagaatgcaaccaggggcaaactgagtttgcgagtgca
gacactgcgtacgtccttgcctactcaatcattatgttgacaacagaccttcatagtccg
caggtgaagaacaagatgactaaagagcaatacatcaagatgaacagagggatcaacgac
agcaaggatctaccggaggaatatctgtctgccatctacgacgagatcgcagggaagaag
atcgctatgaaggagaccaaggaaatgactctgaaatccaacaagcacagtgtggccagt
gagaagcagaggcggctgctgtataatgtagagatggagcagatggctaagacagccaag
gccctgatggaggctgtcagtcacgtccaggctcccttcaccagcgccacacacctggag
catgtcagacccatgttcaagctggcctggaccccgttcctagcagccttcagtgtgggc
ctccaggactgtgacgacactgaggtggcttttctctgtctggagggaatacgctttgcc
atccggatagcctgcatcttcaccatacaactggagcgggatgcgtacatccaggccctg
gcacggttcaccctgctcacagccagctctggcatcactgagatgaagcagaagaacatc
gacaccatcaagactctcatcaccgtcgcccacacagacggaaactacctgggcacctcc
tggcacgagataatgaagtgtatcagtcagttggagctggcccagctgatcgggacgggg
gttaaggccaggtacatctcagggacggttcgggggaaagagggcttcatcaccagcacc
aaggagcagagcaacgatgaatacctgggcctggcaggtgggacagtagaccggaagcag
atcctcagtatccaggagtccataggagagaccagctcccagagtgtggtggtggctgta
gacagaatattcacaggttctaccagactggatggtaatgcaattgtggactttgtgcgc
tggttgtgtgctgtgtctatggatgagctggcctcgcccacacacccccgcatgttcagc
ctgcagaagatagtggagatctcctactacaacatgggacgtatcagactgcagtggtcc
aggatctgggaggtcattggagaccacttcaacaaggttggatgtaaccccaacgaggac
gtggctatctttgctgtggattctctccggcagctgtccatgaagtttctagagaaggga
gagctggcaaacttcagattccagaaggactttctgaggcctttcgagcacatcatgaaa
aagaacagatctccaacaatcagggacatggtggtgcgctgcatagcccagatggtcaac
tcacaggcggggaacatccggtcgggctggaagaacatcttctcagtgttccacctggct
gcctcggaccaggatgagagcatcgtagagctggcattccagaccacggggcacatctcc
acgaatgtatttgagaagcacttcccagccaccatagactccttccaggatgcagtcaag
tgtctgtctgagttcgcctgcaacgcctccttccccgacaccagcatggaggccatccgc
ctcatccgacactgcgccaaatacgtctctgacaggccccaggcgttcaaagactacacc
agtgatgatatgaatgtagtcccagaggaccgggtgtgggtgagagggtggttccccatc
ctctttgagctgtcctgcatcatcaacaggtgtaaactggacgtcaggaccaggggtctg
acggtgatgtttgaggtgatgaagacctatggacacacctttgagaaacactggtggcag
gatctgttcaggatcgtcttcaggatctttgacaacatgaagctgcctgagcagcaaact
gagaaagcagagtggatgacgacgacctgtaaccacgcactttacgccatctctgacgtg
ttcacgcagtactttgagtctctcagtgatgtcctgctggatgacattctggcacagctg
tactggtgtgttcagcaagataatgagcagttggcccggtcaggcaccaactgtctggag
aacgtggtcatcctgaatggagagaagtttactccggagacctgggacaagacctgtaac
tgcatgctggacatcttcaagaccaccatcccacacgcgctgttgacatggagaccagca
ggagcagaaggagatcccatgacaccacaggacatatcagacagacagctggactcaatt
tcccagaagtctgtggacatccagtcccattccgaggaccagcattcaatcaacagcgca
gagagggttgccatggagacccggcggcagagtcagtacagcacaggcatttatgaggac
ggccccagaaacaggaccccaataaagatccaggagcagcggttattctcagccttgctc
attaagtgtgtggtgcagttggagctgatccagaccatagacaacatggtcttcttccct
gcgaccagcaggaaggaggatgcggagaacctggctgctgcacaggtaacggctcactcc
ctctgtggaggatga
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integrated database retrieval system
