Oncorhynchus nerka (sockeye salmon): 115104941
Help
Entry
115104941 CDS
T07952
Name
(RefSeq) uncharacterized protein LOC115104941
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115104941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115104941
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115104941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
DUF6777
Motif
Other DBs
NCBI-GeneID:
115104941
NCBI-ProteinID:
XP_029482231
LinkDB
All DBs
Position
LG22:6569426..6608623
Genome browser
AA seq
1326 aa
AA seq
DB search
MRRAWQSDGTPSTSEDSLSYRRGSTSDPDLRPPARPLSDLYPLKAHVSVAVSPSLLSGCD
AQVQPMTCDFNSEESRLNGSNTATWSSPVIGHPSRIMRLFSTQKKCTVPGDSRGSTRPLS
FQGPPSSAGVPQVWPGLSGLTVMGSFKKLRSSVLQGIQNRGTANQDDEYTSAAIQSGDNV
MVTTNQSPRLRCGKGYRVSNGVSIGQQMAGLSPYGSDNEDEEEVVDEEDGLQRNTWFSRS
IRRAYGAGRISLLDAGEGKRGEGPGLGVSTNQRPGSGSGSVSEVNLHLEGSVNENVNALS
RLSKSADNLHLFKGPFRHKVPCPSPQTDSLGANGDPSIQRTASASSGDLRDRSRSPVRFR
SPVGAKGHMLKLVGSITDLTVRRRPNPPPVTSPGSPVTPLSPLSRLHDDYSRRTPCLPAS
DRQRRPSPARTRAAAERKRNSTSVRLEHTPTIHPQPQSEYHPALFPIEPQEGPDHVFAFP
SINQPFTTTSFSLSARAQRSSLCEGDMPQERQGDGWRARCDSAPHPQREPCGSHSKHQPD
VNAEGKTEPKQCVWTRPDQDQEDQQGTLDEQGREALLGGEETPPPSATSTPSLTPTWPPE
SPTSPMSQTKIGSTETSTSFIPRQRAGRSRPRPISDYAQLVARKYAIPEEETELHPKERT
TNGTPCQDSKSNGGSQDSDSTENYNMNGDLPCRRRQPMSVIGGAEEREDRLPSPLSRPPV
PSHQVPPYKAVSARFRPSTFSQSTPIGLDRLGRRKLHRVLSVEDAGSERSAAVDGDSVSE
EEGSFDELSDVTTYLQPGVELSALSQWISQGQAVYAEALWDHVTMEEQELAFKAGDVIRV
LEAPHKDWWWGMGADREAWFPSSFVRVRVNQEEDSGAESVESCALDQEDPHTDTRDTHTH
SAEHREQMRTNVVKEIMNTERIYIKHLRDICEGYIRQCGKHPGMFTELQLKTIFSNIEDI
YKFQRQFLKDLERKYNTDQPHLSEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLG
RYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYE
AMKNVASLINEGKRRLESVDAIAHWQVAILRWEGADVLECSSELIHSGELTRIVRQGNKT
QQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDNTSVLQMPDGRDPELGILLRNALRLR
NSSTLETLCYLCCRKPQDRQRWLQAFARERQRVQEDQEMGMKISETQRKQAIFNARRSKQ
GKMKTIGYSGSVPPHHHHHQPLHPIHQRHVTVPTSVPQQQVFTLAEPKRKPAHLWYTFTR
HALFRK
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggcatggcagagcgatggaaccccgtccaccagcgaggactctctctcctac
cgccgtggctccacatccgaccctgaccttcgacctccagcccgacccctcagcgacctt
taccccttgaaagctcatgtttcggtggcagtgtccccgtctctgctgtctgggtgtgat
gctcaggtacagcccatgacctgtgactttaacagtgaagagagtagactgaatgggtcc
aacacagccacctggtccagccctgtgataggccacccctccaggatcatgaggctcttc
tctacccagaagaagtgcactgttcctggggacagtcggggctctaccaggcccctctcc
tttcagggccctccatccagtgccggggtcccacaggtttggccaggcctgtcagggctg
accgtcatgggctcctttaagaagctacgctcctcagtgctccagggtatccagaaccga
gggacagccaatcaggatgacgagtacacctcagcagccatccagagtggagataatgta
atggtcacaaccaatcagagcccaagacttagatgtggaaagggctatagagtctccaat
ggggtgtctattggccaacagatggctgggttgagcccttatggttctgacaatgaagat
gaggaggaagtagtagatgaggaagatggactacagagaaacacatggttctccaggagt
atccggagagcgtacggggcggggcgcatctcactgctggatgctggggaggggaaacga
ggggagggtccaggactgggggtttcaaccaaccagaggccaggttcaggctccggttca
gtgtcagaggtgaacctccatttggaggggagtgtgaatgaaaacgtgaatgcgctaagc
agactgagcaagagtgcagacaacctacacctcttcaagggccctttcagacacaaagtc
ccctgtccctctcctcagacagactccctgggtgccaatggggaccccagcatccaaaga
acagccagtgcctcatccggtgatcttagggaccgcagccggagccctgttcgctttagg
agtccagtgggggccaagggccacatgttgaagctagtgggcagtataactgacctgact
gtgagacgcagacctaacccgcctcctgtcacctccccgggctcccccgtgacccccttg
tcacccctcagccgtcttcatgatgactactcacgccgcacgccctgcctgcccgccagc
gaccgccaacgccggccctcgcccgccagaacgagagctgcagcggagaggaagaggaat
agcacttcagtacgactggaacacacgcctaccatccacccccagccccagtctgagtac
cacccagccctgttccccatagagccccaggagggaccagaccatgtcttcgcttttccc
agcattaaccagcctttcactacaacctcattttccctgagtgctcgtgctcagaggagc
agcctgtgtgagggggacatgcctcaggagagacagggagatgggtggagagcacggtgt
gattccgctccacacccccagcgggagccctgtgggagtcacagcaaacaccagccagac
gtcaacgcagagggaaagactgaaccaaagcagtgcgtatggaccagaccagaccaagat
caggaggaccagcagggtacgttagacgaacagggcagagaggcactattagggggtgaa
gagacgccgcctccttcagccaccagtaccccttctctcacaccaacatggcccccagag
tctcccacttcacccatgtcacagacgaaaataggttccacagaaacgtccacgtccttc
atccccaggcaaagggcgggccgatcgaggcctcgaccaatctctgactacgctcagctg
gtagccaggaagtatgccatccccgaggaggagacggagctacatcctaaggagaggact
acaaatggaactccctgtcaagacagcaaaagcaatggaggctcgcaggacagtgacagc
acagagaactacaatatgaatggagatctcccgtgccggaggagacagccaatgtctgtt
attggaggagctgaggagagagaggaccgtctgccttctcccctgtcgcgcccccctgtc
ccgtcccaccaagtgcccccatacaaagcggtgtcggccaggttccgcccctccaccttc
tcccagagcacccccatcggactggaccgcctcggacgacgcaaactacacagagtcctc
agtgttgaggacgccggctcagagcgttctgcagcggtggatggtgacagtgtgagtgag
gaggaggggagcttcgatgagctcagtgacgtcacaacgtacctgcagcctggggtggag
ctgtctgctctcagccagtggataagccagggtcaagcggtgtatgcggaggccctgtgg
gaccatgtgacgatggaggagcaggagctggcgttcaaggcgggggatgtgatccgggtg
ctggaggcccctcacaaggactggtggtggggcatgggggcagacagggaggcctggttc
ccctctagcttcgtcagggttcgtgtgaaccaggaggaggactcaggagcagaaagtgta
gagagttgtgctctggaccaggaggacccacacactgacacccgtgacactcacacacac
agcgccgagcaccgtgagcagatgaggactaacgtggtcaaagagatcatgaatactgaa
cgcatctacatcaaacatctccgggacatctgtgagggctatatccgtcagtgtggtaaa
cacccgggcatgttcactgagctgcagctaaagaccatcttcagtaacatcgaggacatc
tacaagttccagagacagttcctcaaagacctggagaggaagtacaacacagaccagcct
cacctcagtgagataggagcctgtttcctcttacagggggagggtttttccatctactct
gagtactgtaacacccaccctgcagcgtgtggggagctgcagcgcctcatgaagctgggc
aggtacaagcacttctttgaggcctgccggctgctgcagcagatgattgacatctccatc
gccggcttcctgctcacgcctgtccagaagatctgcaagtaccccctgcagctgggagag
ctgctcaaatacacgcccaaagaccacagtgactatggtggagttagtgacgcgtacgag
gcgatgaagaatgtggcgagcctgatcaacgaggggaaaaggaggctggagagtgttgat
gccatagctcactggcaggtggctatcctacgctgggagggagcagatgttctggagtgc
agctcggagctgatccattctggggaactcacccggattgtccggcagggcaacaagacg
cagcagcgcagcttcttcctgttcgaccaccagctggtgttctgtaagaaggacgtactg
cgccgcgacctgctgcactaccgtggtcgcctggacatggacaacacatcggtgctgcag
atgcccgatggcagggaccccgagctgggcatcttgctgaggaacgccttgcggctccgg
aacagctctaccctggagaccctgtgttacctctgctgcaggaaaccccaggatagacaa
cgctggctgcaggccttcgccagggagagacagagggttcaggaggaccaggagatggga
atgaagatcagtgaaacgcagagaaaacaagccatcttcaatgcaagaagatccaaacaa
gggaaaatgaagaccataggctactctggctctgtcccgccccaccaccaccaccaccaa
cccctgcatccaattcaccagcgccatgttactgtgccaaccagtgtgcctcagcagcag
gtgttcacattggccgagcccaagcgaaagcccgcccacctgtggtacacctttactcgg
catgccttgttcaggaagtga
DBGET
integrated database retrieval system
