Oncorhynchus nerka (sockeye salmon): 115105004
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Entry
115105004 CDS
T07952
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
one04114
Oocyte meiosis
one04120
Ubiquitin mediated proteolysis
one04141
Protein processing in endoplasmic reticulum
one04310
Wnt signaling pathway
one04340
Hedgehog signaling pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115105004
04120 Ubiquitin mediated proteolysis
115105004
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115105004
04340 Hedgehog signaling pathway
115105004
04350 TGF-beta signaling pathway
115105004
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115105004
04114 Oocyte meiosis
115105004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115105004
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
115105004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Motif
Other DBs
NCBI-GeneID:
115105004
NCBI-ProteinID:
XP_029482371
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Position
LG22:complement(8522413..8537284)
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AA seq
776 aa
AA seq
DB search
MSSNRGQNPHGLKQIGLDQIWDDLRAGIHQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSAVPNKPSKKSSTPGGAQFVGLELYKRLKEFLKNYLTSLLMDGEDLMDECVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIEKERNGETINTRLISGVVQSYVELGLNEEDAFAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARRCEQVLIEKHL
EIFHTEFQNLLDADKNQDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLNVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNTVTKMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVL
SSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYT
LQASTFQMAILLQYNTEDLYSVQQLTDSTQIKTDILVQVLQILLKSKLLVLEDENANIDE
VEFKPETLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMK
MRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaacaggggccagaacccacatgggttgaagcagatcgggctggaccagatc
tgggacgacctgagggctggcatccaccaggtgtacacacggcagagcatggcaaagtca
cgctacatggagctctacacccatgtgtataactactgtaccagcgtgcaccagtccagt
caaggccgggggtctgccgtccccaacaagccctccaagaagagcagtactcctgggggg
gcccagttcgtaggcctggaactctacaagagactcaaggagttcctcaagaactacctg
accagtctgctcatggatggtgaggacctgatggatgagtgtgtgttgaagttctacaca
cagcagtgggaggactaccggttctccagtaaggtgctgaatgggatctgtgcttacctc
aacaggcactgggtcagacgtgaatgtgacgagggacgcaagggcatctacgagatctac
tcgttggcgttggtaacatggagggagtgtctattcagacccctaaacaaacaggtaacg
aatgcggtcctgaagctgatcgagaaggagagaaatggagagaccatcaacaccagactc
atcagtggtgtggtgcagtcctacgtggagctggggctgaatgaggaggatgcgtttgct
aagggtcctacgctgtcagtgtataaagaatactttgagtgccagttcctcacggacacc
gaacgcttctacacacgagagagcactgagttcctccaacagaaccctgttaccgagtac
atgaagaaggccgaggcccgtctgctagaggaacagaggcgtgtgcaggtgtacctccat
gagtccactcaggatgagctggccaggcggtgtgaacaggtgctcatagagaaacacctg
gagatcttccacacagagttccagaatctactggatgctgacaagaaccaagatctaggt
cggatgtataacttggtgtctcgtataacggatggcctaggagagctaaagaaactccta
gaaacacacatccacaaccagggcctggccgctatagagaaatgtggagaggccgctctc
aacgaccctaaggtgtatgtccagaccacactgaatgtccataagaagtacaacgctctg
gtcatgtctgccttcaacaacgacgctggcttcgtagctgctctagacaaggcgtgtggt
cgtttcatcaacaacaacacggtcactaagatggcccagtcctccagcaaatcacctgaa
ctactggctagatactgtgactctctgctcaagaagagttctaagaacccagaagaggca
gagttggaggacacgctcaaccaagtgatggtggtgtttaagtatatagaggacaaggat
gtgttccagaagttctatgctaagatgctggctaaacgcctcgtccaccagaacagtgct
agcgacgacgcagaggctagcatgatctccaaactcaagcaagcgtgtggctttgagtac
acatctaaactacagaggatgttccaggacatcggagtcagcaaagacctcaacgaacag
ttcaagaaacacctgaccaactctgaacctctcgacttggacttcagtatccaagtgttg
agttccgggtcctggccgttccagcaatcatgcaccttcgctctgccctccgagttggag
cgtagctaccagcggttcacagcattctacggcagcagacacagcggtcggaaactcacc
tggctctaccacctgtctaaaggagagctggtcaccaactgctttaaaaacaggtacact
ctgcaggcctctaccttccagatggctatcctgctgcagtacaacacagaggacctgtac
tccgtacaacaactcactgacagcacacagatcaaaactgacattctggttcaagtgttg
cagatcttgttgaaatccaaattgctggtcctggaggatgagaatgctaacatagacgaa
gtggagttcaaaccagaaaccctgatcaaactcttcctgggatacaagaataagaagctg
cgtgtgaacattaacgttcctatgaagactgaacagaaacaggagcaggagaccacacac
aagaacatagaggaggaccgcaagctcctcatacaggctgccatagtgaggataatgaag
atgaggaaggttctgaaacaccagcagctcctggctgaagtcctaaaccagctctcgtcc
cgcttcaaacccagagtccctgtcattaagaagtgtatagacatcctgatagagaaggag
tatctggagagagtggatggagagaaagacacgtacagctacctggcttaa
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