Oncorhynchus nerka (sockeye salmon): 115105012
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Entry
115105012 CDS
T07952
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
one04054
]
115105012
Pattern recognition receptors [BR:
one04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115105012
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_6
LRRNT
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
115105012
NCBI-ProteinID:
XP_029482386
LinkDB
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Position
LG22:9499820..9504982
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AA seq
963 aa
AA seq
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MELKITLSGKGNGSTYSRLSFFLCILLYFWVLFNPVNGYSMKHCRIRESLNTSVLCDGRN
LNAVPADIPLLVRSVNIAKNNISQIKSEDFKDLKFLNMLIMYSNRISHVENGSFSDLVAL
EQLNLAFNKLTSLSDQMFKGLDNLTVLHLDNNHISSIASSSFQLLFSLKVLNLTSNKLHC
FKELKHILQLPSLLKLFIGNNSLNSLQSQEISNRSIGLTELDLSRNPLEIFSVTADIFPY
LKKLDLSFCGINGSMEWDVANRYFLSNVSSLDLSGIHMSLQGIGSVLQSINFSLASLGLD
KIGKDNLINVACHIPTLKTLRLQCNNFSSVSDKLLQSCTQVTDLDISGNNITDLSEAAFR
LIKDLKTLRLGYDGLSSVPNATRNLRTLKKLDLSHNIIKTLGCSDFSNLRRLEKLYLNNN
LISNLEGCVFLDLRALNSLTLRRNRILNLGNAFTKGLQHLKSLDLGSNKLTNIRTNDFKS
LRSLEDLALYDNDIKTLEDGAFVGLAKLKNLVLLNNVIGKSEIRGAVFKGLRSLKTLNMA
SNVIKYEKDEQLQQPPFTDLSSLENLYIFSQHYSKYMRQSCLPSNFLEGLNMLSEFQAGN
LHIAYLHPDTFIHTPQLLSLDISQNFFHALSPELFHPIPKLKRLTISKTELESLDFLIEA
NLTQVHFLKVRQNKIKWTNETVLHSLPALTLLDMQRNPFICDCRNAWFVQWAESNNQTQV
AYAHDYPCSYPDDLKDTKLLDLDTHSCSVDLGIFYFISTTSLVLLTLLGSFIYHLLRWQV
VYAYYLFLAYLHDSKRRNRQTPHQYDAFVSYNSHDECWVVRELLPELEGEQGWRLCLHHR
DFLPGKPIIENITDAIYRSRKTICVITHRYLQSEWCSREIQVASFRLFDEQKDVLILVFL
EEIPDHQLSPYHRMRRLVKRRTYLSWPRAGEDTRVFWQKLQVALETRDWPAEENPILTGV
ERQ
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaaataaccttgtcaggaaaaggaaatgggtctacatattctcggttgagt
ttctttctatgcattcttctgtatttctgggttctatttaatccagtaaatggctactca
atgaaacactgcagaatcagggaatctctaaacacgtctgtgctatgtgatggcaggaac
ctcaatgccgtaccagcagacatcccattattggtgagatctgtaaacatagcaaagaat
aacatttcacagataaaaagtgaggacttcaaagatctaaagttcctcaacatgttaatc
atgtacagcaacaggatctctcatgttgagaatgggtctttttcagacctggtggctcta
gagcagctgaatctagcctttaacaaactcacatccctctcagaccaaatgtttaagggc
ctggataacctcacagtactacacctggataacaaccacatctcaagtattgcctcctca
tcttttcagttactcttcagcttgaaggtactgaacttaaccagcaacaaactgcattgt
ttcaaggagctgaagcacattttacaattgccaagcttgctgaagttgttcattgggaac
aacagcttgaactctttgcagtcacaggaaatatcaaataggtcaatagggctgacagag
ctggatctatccaggaatcctctggagatcttcagtgtcacagcagatatttttccctat
cttaagaaactagacctctccttctgtggcattaatggaagcatggaatgggatgtagcg
aacaggtattttctgagtaatgtgagcagcctcgacttgagtggcattcacatgtcttta
cagggtattggttcggtgctccagagcatcaacttttcgttggcatctctggggctggat
aaaataggaaaagataacctcattaatgtagcctgccacatacctacactgaagaccctc
cgattgcaatgtaacaacttcagtagtgtctctgacaagctgctgcagtcctgcacacag
gtgactgacctggacatatcaggtaataatattactgacctgtcagaagctgcttttcga
ttaataaaagatcttaaaactctgagactaggctatgatggcctctcttctgtgccgaat
gctacaaggaatctccgcacattaaaaaaattggatctcagccacaacatcatcaaaact
ttaggctgctcggatttctccaatctaagaagacttgaaaaactctatcttaacaacaat
ttaatctcaaaccttgaagggtgtgttttcctggatttaagggccttaaatagcctgaca
cttagaaggaacagaatcctaaacttgggtaacgctttcacaaagggtttgcaacatcta
aagagcttggatttaggatccaataaactaaccaacatcagaacaaatgacttcaaaagc
ttaagatcacttgaggatttggctttatatgacaatgacataaagacactggaagatgga
gcctttgtgggtttggccaaacttaaaaatcttgtcctgctaaacaatgttataggtaaa
agtgaaatccgaggtgctgtgttcaaaggacttagaagcttaaaaactctcaatatggct
tccaatgttatcaaatatgaaaaagatgaacaactacaacaaccacccttcactgacctg
tcatctctggaaaacctctacatatttagtcagcattatagtaagtatatgagacagtct
tgtctaccttccaactttcttgaaggtctgaacatgttatcagagttccaagcagggaat
cttcatatagcgtacctgcaccctgacacattcattcacacaccccagttgttgtccctt
gatatcagccagaatttcttccatgccctctccccagaactctttcacccaatccccaag
cttaaaagactcaccatctccaaaactgaacttgagtcattagatttccttatagaagcc
aatctcactcaagtccatttcttaaaggtgagacagaataaaattaaatggaccaatgag
acagtgctgcactctctcccagccttaactctcctggatatgcaaaggaatcctttcatt
tgtgactgcagaaatgcttggtttgttcaatgggctgagagcaacaaccaaacacaagtt
gcttatgcccatgactatccatgtagctatccagacgatctcaaggacactaaactgttg
gacctggacacccactcctgttcagtggacctaggcatcttctacttcatctcaaccact
tctctggtcctcctcaccctgctggggtcctttatctatcatctcctgaggtggcaggtg
gtatatgcctactacctcttcctggcttatctccatgactccaagcggaggaacagacaa
actcctcatcagtacgatgccttcgtttcctacaacagccatgatgaatgctgggtcgtg
agggagctgctgccagagttggagggagagcagggctggaggttgtgtcttcaccaccgg
gacttcctgccaggtaaacccatcatagagaacatcacagacgccatctacaggagcagg
aaaaccatctgcgtgatcacccaccgatatctgcagagcgagtggtgctccagagagatc
caggtggccagcttccgtctttttgatgagcagaaggatgtgctgatcctggtgtttctc
gaagagatcccagaccaccagctctcaccctaccaccgcatgaggaggctggtgaagaga
cgcacctacctgagctggccaagagctggggaggacacaagggtcttctggcagaaactc
caggtggcgttggagaccagggactggcctgctgaggagaaccccatcctcaccggggtg
gagaggcagtga
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