Oncorhynchus nerka (sockeye salmon): 115105039
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Entry
115105039 CDS
T07952
Name
(RefSeq) transforming growth factor beta activator LRRC33-like
KO
K26317
transforming growth factor beta activator LRRC33
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115105039
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_EndoS
LRR_NXF1-5
LRR_9
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
115105039
NCBI-ProteinID:
XP_029482436
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All DBs
Position
LG22:11617603..11627637
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AA seq
691 aa
AA seq
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MPIQGLLPTLVCLTIWTLWSLLIPALSHPHHSLCRLTQKIALCSDSEISSVPRDLPDNIE
ELHLTHNHIQMLQDDSLSRYISLRTLSCAKNRLETVGSKLFHNSPHLESLNLAANQLHVG
YQETSRALLTLSRLKVLDLSENQLTNDIASVLLQNMTSLEYLNLSRNLLLRLDESSFSDL
HQLRELDLQRNMLFEIVDAFDHLHKLQRLNLAFNHLACLMDFDMTQLVVLNASHNNIEWF
IANQDLQETFQLETLDLTNNNLLFFPFLPIQSRLRNLHLSQNRVSFYEHLADTAGYPNWT
NSVQFFNLRGNVTNVTAQLWDESLHGDISSLDLLDLSGNQVGYFPQGFISKMPSLVRLRM
QTNCLEVLNLTLEKLPGTLYELDVSNNRLTELHADQGSLSELGKLSYLNLSQNDLQSLPP
RLFSSLTSISSVDISFNRIGICPLEEWGGNRDGCNQSDCVVWRNIISLRQLHLSGCNLGR
LPSSAFTGTPLTHLELSNNPELNIGPRSIVGLSRTLHHLGLGNTGLRDFDFSPFHHLKSL
NISRNSLTQLPASLQRLELRLLDLRDNKLNTVPSDQANTLALKLQTVFLNGNTFNCCQLD
WYRTFERAKTVNIIDLSDISCQDLTKNTHKVVFLDPLMCGRSEEESVYWYILLFIVPVLC
LVGISVIFLLTFRPRLLPKAIKNKCRRPTSY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccaaggcctactccctaccctggtctgtctcaccatatggaccctgtggagc
ctgctaatacctgccctcagccaccctcaccacagcctctgcagactgacccaaaagatt
gctctctgtagtgatagtgagatctcatctgtgccgagggacctaccggacaacatagag
gaactccacctgacacataaccacattcagatgctacaagatgactccctctcccgctac
atctcccttcgcactctaagctgtgcaaaaaaccgcttggagacagtggggtcaaaactc
tttcacaactcacctcatctagagagcctcaatctagctgccaatcaacttcacgttgga
taccaggaaactagcagggcactgctcaccctgtctagactcaaagttctggatctgtca
gaaaaccagcttacaaacgacatagcttcggtcctcctccagaatatgacgtccctggag
tacctcaacctttccaggaacctcctgctgaggctggacgaaagttccttcagcgacctc
caccagctcagagagctggacctgcagaggaacatgctgtttgagatcgttgatgccttt
gaccacctgcacaagctccagagactaaacctggccttcaaccacctggcctgcctgatg
gacttcgacatgacccagctcgtggtgctcaacgcaagtcacaacaacattgagtggttc
atagccaaccaggacctccaggaaactttccagctggagaccctggatctcaccaacaac
aacctccttttcttccccttccttcccatccagagccgcctgaggaacctccatctgtcc
cagaacagggtgagcttctacgaacacctggcagacaccgctggctacccaaactggacc
aacagtgtccagttcttcaacctgaggggcaacgtgaccaatgtcacagcccagctgtgg
gacgagagccttcacggtgacatctcctctctagacctgctggatctgagtggaaatcag
gtgggctacttcccccaagggtttatcagcaaaatgcctagcctggtcaggctcaggatg
cagacaaactgtctcgaggttttaaatctaacactggaaaaacttccagggacgttgtac
gagttggatgtgagcaacaatagattgacggagctccatgctgaccaaggtagtttaagt
gagttaggaaaactgagctatctcaacctgagccagaatgacctgcagagtcttcctcct
agactgttctcctctctcaccagcatcagctctgtggatatcagctttaacagaattggc
atatgcccccttgaggaatggggcgggaacagagatgggtgtaaccaatcagactgtgtt
gtttggagaaacatcatctctctgagacagctccacctatcagggtgcaacctggggaga
ctgccatcgtcagcattcacagggacacctctaacacacctggagctgtctaacaaccca
gaactcaacattgggcccagatcgatagtaggcctcagcagaactttacaccatctagga
ttgggaaacacaggcctgagagactttgacttctcccctttccaccacttaaagtctttg
aacatttccagaaactctcttactcagctccctgcttcactacaacgccttgagctgagg
ctgctggacctgagggacaacaaacttaacactgtcccctcagatcaggctaacacatta
gccttgaaactacagactgtttttcttaatggaaacactttcaactgctgccagttggac
tggtacaggacgtttgagagggcgaaaacggtcaatatcatcgacctctcagacatttca
tgtcaggatctgacaaaaaatacacacaaagtggtgtttttagaccctttaatgtgtggt
aggagtgaggaggagtctgtatactggtacatcctgttgtttatcgtacctgtcctctgc
ctggttgggatttctgtcatcttcctgctcaccttcaggcccagactgcttcccaaggcc
attaaaaataaatgccggaggcccacgtcatactga
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