Oncorhynchus nerka (sockeye salmon): 115105074
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Entry
115105074 CDS
T07952
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115105074 (trdmt1)
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
115105074 (trdmt1)
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115105074 (trdmt1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
115105074
NCBI-ProteinID:
XP_029482504
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Position
LG22:14013985..14033015
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AA seq
387 aa
AA seq
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MENLRVLELYSGIGGMHYALTESGVAAKVVAAVDVNTTANEIYKHNFPNTPLLPKTIEGM
TLDDFNKLAFDMILMSPPCQPFTRIGLQGDISDPRTKSFLYILNLLPRLIKLPRFILLEN
VKGFETSSARDSLVKTLKECGYNYQELMVSPTSLGMPNSRLRYFMIAKAPPGSFSFHTTS
EIQEGFPQPADEVLLEPSSPISPSPTSTAYQEEVHKEDEGGILYKLERAQDAERKSSQNR
DQSLRQISVYLEDQGEGEMEQYLLPTKTLLRYALLMDIVRPTCRRSVCFTKGYGHYVEGT
GSVLQSCMETDMEAAFKSPERLSDEEKLNQLSRLKLRYFSPREIANLMGFPKHFTVPKNI
STKQQYRVLGNSLNVHVVARLIELLVS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcagagtactagaattgtacagcgggatcggaggaatgcattatgcatta
acagagagtggtgtggcagcaaaggtggtagctgcagtggatgtgaacaccacagccaat
gagatctacaaacacaacttccccaacactcctttacttcccaagaccatagagggaatg
acattggatgatttcaacaaactggcgtttgatatgatcttgatgagccctccatgccaa
cctttcactaggattgggttacaaggtgacatatctgaccccagaaccaagagctttctc
tacatcctcaaccttctaccaaggctcatcaagttgccacgcttcattctgctggagaac
gtgaaaggctttgagacgtcctccgccagagactctttggtgaaaacgctaaaggaatgt
ggatacaactatcaggagctcatggtttctcctacaagtctggggatgcccaactccaga
ctccggtatttcatgattgccaaagcaccaccaggatctttctccttccacaccacttca
gagatccaggaaggtttcccgcaacccgcagacgaggtcttattagagcccagttctcca
atctcacctagtcctacttcaaccgcctaccaagaggaagttcacaaggaagatgaaggt
ggtatcctgtacaagctagagcgggctcaggatgctgagaggaagagcagtcagaacaga
gaccagtccctcagacagatcagtgtctacctggaggaccagggagaaggggagatggag
cagtacctccttcccacgaagaccttgctgcgctacgctctgctcatggatatagtcagg
cccacctgcaggagatctgtctgcttcaccaaaggctatggacactacgtggagggaaca
ggctctgtgcttcagtcctgtatggaaaccgatatggaagcagcgtttaagtctccggag
cgtctgtctgatgaggagaaactaaatcagctgtccaggttgaagctccgctacttctcc
cccagagagatagccaacctcatgggcttccccaagcacttcactgtcccaaagaacatt
tccaccaagcagcaataccgagtcctggggaatagcctgaacgtacatgtggtcgcccgg
ctcatagaactcttggtatcctaa
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