Oncorhynchus nerka (sockeye salmon): 115105093
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Entry
115105093 CDS
T07952
Name
(RefSeq) cullin-2-like isoform X1
KO
K03870
cullin 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115105093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115105093
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Cullin
115105093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Rio2_N
DUF4423
Motif
Other DBs
NCBI-GeneID:
115105093
NCBI-ProteinID:
XP_029482550
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Position
LG22:15872062..15891335
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AA seq
776 aa
AA seq
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MSLKPRVVDFDETWNKLLTTIKAVVMLDYVERATWNDRFSDIYALCVAYPEPLGEKLYTE
TKVFLENHVRQLYKKVLESEEKVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTE
ADLQYGYGWVELNEPLMEIGELALDMWRKLMIEPLQAVLIRMLLNEVKNDRCGEDPNQKV
IHGVINSFVHVEQYKKKFPLKFYQEIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVL
GRLKDEEVRCRKYLHPSSYAKVIHECQQRMVADHLQFLHGECQNIIRQEKRDGQSGYRSD
DMANMYTLLRAVSSGLPHMIQELQVHIHDEGIRATSNLSQENMPTLFVESVLEVHSKFVQ
LINTVLNGDQHFMSALDKALTSVVNHREPKSICKAPELLAKYCDNLLKKSAKGMTENEVE
DKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSLSMDSEEAMINKLKQACGYEFTSK
LHRMYTDMSVSADLNNKFNNFIKTQESPVELGISFQIYVLQAGAWPLTHVPSSTFAIPQE
LEKSVQMFELFYNQHFSGRKLTWLHYLCTGEVKMNYLSKPYVAMVTTYQMAVLLAFNNSE
TVGYKELQDSTQMNEKELQKTIKSLLDVKMLNHDSQKVRGQVSAATDSPGDLESAGSSLL
EEIEAESTFSLNMSFTSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMK
ARKVLRHNALIQEVINQSKARFNPSISMIKKCIEVLIDKQYIERSQSSADEYSYVA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgaagccgcgggtggtggactttgatgaaacatggaacaagctactgacgaca
atcaaggctgtggtgatgcttgattatgtggagagggccacatggaacgacagattctct
gacatctatgccttgtgtgttgcttacccagagcctctgggtgaaaagttatacacagag
accaaggtgttcctggagaaccatgtcagacaattgtacaagaaagttctagagtcggag
gagaaggttttagttatgtaccacagatactgggaggagtatagcaagggagcagactac
atggattgcttgtacaggtacctcaacacacagttcatcaagaagaacaaactgacagag
gcagacttgcagtatggctatggatgggttgaattgaacgaaccacttatggagatagga
gagctagcactagacatgtggaggaaactgatgatcgagcccctgcaagctgtcctgata
cggatgctgctgaatgaagtcaaaaatgaccggtgcggtgaggaccctaatcagaaagta
atccatggggttatcaactcctttgttcatgttgaacagtacaagaaaaagtttcctctc
aagttttatcaggaaatcttcgaagggccatttctgacgaaaacaggagaatattacaaa
caggaagcctccaatttactgcaagagtccaactgctcacagtatatggaaaaggtttta
ggacggttgaaagacgaggaggtgcgatgtcgaaagtacctgcatcccagctcctacgcc
aaagtcatccacgaatgccagcagaggatggtggcggaccacctgcagttcctccatggg
gagtgtcagaacatcatccgccaggagaagagagatggtcagtctggttacaggagcgac
gacatggctaacatgtacaccctgctacgagccgtgtccagtggtttacctcacatgatc
caggagctccaggtccatatccacgacgagggcatccgagccaccagtaacctctctcag
gaaaacatgccaaccctgtttgtggagtccgtgttggaggttcacagtaaatttgttcag
ctcattaacacagtcctgaatggggatcagcacttcatgagcgcacttgataaggctttg
acgtctgtggttaaccacagggagcccaaatccatctgcaaagcacctgaactgctcgcc
aagtattgtgacaatctgctgaagaagtctgcaaagggaatgacagagaacgaggtggaa
gacaagctgaccagcttcattaccgtgttcaagtacatagatgacaaggacgtttttcaa
aagttttatgcaagaatgttagccaagcggttaatacacgggctgtctttgtccatggac
tcggaagaagccatgatcaacaaactaaagcaagcgtgcggctacgagttcacaagcaag
ctgcacagaatgtacacagacatgagcgtcagcgcagacctgaacaacaaattcaacaac
ttcatcaagacccaggaatcaccggtcgaactgggcatcagcttccagatctacgtatta
caggcaggagcctggcccctcacacacgtcccctcctctacctttgccatcccacaagag
ctggagaagagtgttcagatgtttgagttgttctataatcagcacttcagcgggaggaag
ttgacctggctgcactatctctgcacaggtgaggtgaagatgaactatctctccaagccc
tacgttgccatggtgaccacctaccagatggcggtgctgctggcgttcaacaacagtgag
acggtaggctacaaggagctccaggactccacccagatgaatgagaaagagcttcagaag
accatcaagtccctgctggatgtcaagatgctcaaccacgactcccaaaaggtcaggggt
caggtgtcagcagcaacagattcacctggagatctggagtcagcagggtcttctttattg
gaggaaatcgaggcagagtccacattttcactaaatatgagtttcaccagtaaaagaaca
aagttcaagatcacaacgtcaatgcagaaagacacaccacaggagatggagcagacgagg
agtgcagtggatgaggaccgcaaaatgtatttacaagctgctatcgtgagaatcatgaag
gcacgcaaagtgctcagacacaatgccctaatacaggaggtcatcaaccagtccaaagcc
agatttaaccccagtatcagcatgatcaagaagtgcattgaggtgctcatcgacaagcag
tacatcgagaggagccagagctctgcagacgagtatagctacgtggcgtaa
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