Oncorhynchus nerka (sockeye salmon): 115105181
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Entry
115105181 CDS
T07952
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115105181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115105181
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115105181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
BAR
SH3_9
PH
SH3_1
Ank_4
SH3_2
Ank_3
Ank_5
Ferritin_2
DUF4404
Motif
Other DBs
NCBI-GeneID:
115105181
NCBI-ProteinID:
XP_029482734
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Position
LG22:complement(26847996..26925175)
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AA seq
1165 aa
AA seq
DB search
MSQVMRSSSSRLSSFSSKDSLWNPSRMPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCR
NTVNVLEEALDQDRTALQKVKKSVKAIYSSGQDHVQNEENYAQALDKFGSNFISRDNPDL
GTAFVKFSTLTKELSTLLKNLLQSLSHNVMFTLDSLLKGDLKGVKGDIKKPFDKAWKDYE
AKFTKIEKEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGV
DLLQNLIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKHLTALRDLIK
SSLQLDQKESRRDSQSKQGGYSMHQLQGNKEFGCEKKGYLMKKSDGLRKVWQRRKCSVKG
GMLTISHATSNRQPVKLNLLTCQVKPCAEDRKCFDLISHNRTYHFQAEDEPEFVIWISVL
SNSKEEALNMAFRGGEDGGGGGGEDGLEDLTKAIIDDVLRIPGNEVCCDCGAADPKWLST
NLGILTCIECSGIHREMGVHISRIQSMELDKLGTSELLLAKNVGNSSFNEIMEGNLPCPS
PKPTSSSDMTVRKEFINAKYVDHKFARKTCTSSAAKTIELCEAVKSRDLLSLIQVYAEGV
ELMEPLPEGGQEAGETALHYSVRTADQTSLHLVDFLVQNSGNLDKQTEWGNTALHYCCMY
EKHECLKLLLRGKPATDITNQNGETALDVARRLKNSQCEEALLQAAAGKFYPHIHVEYEW
SLRLDEIDESDDDLDDKPSPIKKDRSPRPQSFCHASSMSPHDKLSLPGFISHRDKQQRMS
YSAFTNQMYSASTDLTSSSSPVADAPPLPPRNQGKAPHLAFLGSHSHYATLAGTRPYITP
PSTLTPGGSSTLSKKKPPPPPPGHKRTLSDPPSPLSHSRGGLSGGSDSTPPPVNKMSPLS
NKFEGIPQQQSTTSSNTKSTLGPRVLPKLPQKVALRKIDTIHPSMDKPGLPPEVLQKSPP
GPECLTKAILPDKPQLGDLLPKPQLSELPPKPGELPPKPQLANLPPKPQLGDLPPKPQLK
DLPPKPQLSQDGHPKPGAADLPNPRPPPGELALKPQPPDSPVANQQAEMESPSPQGSEDT
NGSPACAPETPVPLPRKINTGKTKSRRVKTIYDCQADNDDELTFVEGEVIIVTGEEDGEW
WIGHIEGQTERKGAFPMSFVHILSE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtcatgagatcctcctcttcccgtctgtcaagtttctcttctaaagattct
ttatggaatccgagtaggatgccggatcaaatatcggtgtccgagtttctctcggagaca
acagaggattacaattctcctaccacgtccagcttcacgacccgcctgcagagctgtagg
aacacagtcaacgttctggaagaggctttggatcaggacaggactgcgctgcagaaggtg
aagaaatcagtcaaggccatctacagctcaggccaagaccatgtccagaatgaggagaac
tatgcccaggctctagataagtttggcagcaatttcatcagcagagacaaccctgacctg
ggaacagccttcgtcaagttctccaccctgaccaaggagctgtcgaccctgctcaagaac
ctgctccagagcctgagccataatgtgatgttcaccctggactcgctgttgaagggggac
ctgaaaggcgtgaaaggggacataaagaagccctttgacaaggcctggaaggattatgaa
gctaaatttacaaagatcgagaaggaaaagagggagcatgccaagcagcatgggatgatt
cgcacggagataacaggcgcggagatcgctgaggagatggagaaggaacgccgtctcttc
caactccagatgtgtgagtatctgatcaaagtcaatgagatcaagaccaagaagggagtg
gaccttctccagaacctaatcaagtattaccacgcacagtgcaatttcttccaagatggc
ttgaagacagcggataagctgaagcagtacattgagaagctggctgctgacctctacaat
ataaagcagacccaggatgaggagaagaaacatctgactgctctcagagatctgatcaag
tcctcccttcagctggaccagaaggagtctagaagagactcccagagtaagcagggtggc
tatagcatgcaccagctgcagggcaacaaagagtttggctgtgaaaagaaaggctacctg
atgaagaagagtgatgggctgaggaaggtgtggcagaggaggaagtgttctgtgaagggt
ggcatgctcaccatctctcatgccacgtccaacaggcagcctgtgaaactcaacctgctc
acctgccaggtcaagccctgcgctgaggacaggaagtgctttgatctaatttcccacaac
cggacatatcacttccaggctgaggatgaaccggagtttgtcatctggatctcggtgtta
tccaacagtaaggaggaggctctgaacatggcattccgtggaggagaggacggaggagga
ggaggaggagaggacggcctcgaggacctgaccaaagccatcatagatgacgtgctgcgc
atccctggcaacgaagtctgctgtgactgtggcgctgcagatccaaaatggctgtccact
aacctaggcatcttgacctgcatcgagtgctctggtatccaccgggagatgggagtgcac
atctcacgcatccaatccatggagctagataagctaggcacctctgaactcttgctggcc
aagaacgtaggaaacagtagtttcaatgaaataatggaggggaaccttccttgtccctca
ccaaagcccacttcttcaagtgatatgacagtgaggaaggagttcatcaatgctaagtat
gtggaccacaagtttgcacggaagacctgtacctcctcggcagctaagaccatcgagctg
tgtgaggcggtcaagtccagggatctgctgtctctcatccaggtgtacgctgagggggtg
gagctaatggagcccctgcctgagggtggacaggaggccggagagactgcactccactac
tctgtgcgcaccgctgaccagacctcactgcatctggtcgacttcctcgtgcagaacagt
gggaacctggataagcagacagagtgggggaacactgctctgcactactgctgcatgtac
gagaaacacgaatgcctcaaactactgctgaggggcaaaccagccactgacatcaccaat
cagaatggtgagacggcactggatgttgccaggcgactgaagaacagtcagtgtgaggag
gctctgttgcaggctgcagcgggcaagttttaccctcacatccacgtggagtatgagtgg
agcctgaggcttgatgagatcgacgagagcgatgacgatctggatgacaagcctagtccc
atcaagaaagaccgctctcctaggccgcagagtttctgccacgcgtccagcatgtctcct
catgacaagctgtctctgccaggcttcatcagccaccgggacaagcagcagcgcatgtct
tacagcgccttcaccaaccagatgtactccgcctccaccgacctcacttcctcttcctcc
cctgtggccgacgccccccctctgccccccaggaaccagggcaaagcgccccatttggca
ttcctcggctctcactcgcactacgccactctggctggcactcgaccatacatcactcct
ccctccaccctcacccctggaggcagctccaccctgtctaagaagaagcctccgccccct
ccccctgggcacaaacgcaccctgtctgacccgcccagcccgctctcccacagtagaggg
ggcttatccgggggaagtgactccacccctcctcctgtgaacaagatgtcacctttgtcc
aacaaatttgagggcattccacagcagcaaagcactacttctagcaacacaaagtctaca
cttggtccaagggttctacccaaactacctcagaaagtggcactgcgtaagatcgacacc
atacacccatctatggacaaacctggcctgcccccggaggtgctccagaaatcccctcca
ggacctgaatgcctaacaaaagccatccttcccgacaagccccaactaggggaccttctc
cccaaaccccagctctctgaactgccccctaaacctggagaactgccccccaagccccag
ctcgccaacctccctcccaaaccccagttaggggacctaccgcccaaaccccagctcaaa
gacctaccccccaagcctcagctctcccaagacggccatccaaaaccaggggcagcagat
ctgcccaatccgagaccaccccctggagagcttgcgctgaagccccagccccccgactcc
ccggtggctaatcaacaggcagagatggagagcccgtccccccagggcagcgaggacacc
aatgggagcccagcgtgtgctccagagacaccagtgcccttgccccggaagatcaacacg
gggaagaccaaatctcggcgggtgaagacaatctatgactgtcaggctgacaacgatgac
gagctgacgtttgtggagggagaggtgatcatagtgacaggagaggaggacggggagtgg
tggatcggccacattgaagggcagacggaaaggaaaggggcattcccaatgtcctttgtc
cacatcttaagtgaatga
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