Oncorhynchus nerka (sockeye salmon): 115105182
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Entry
115105182 CDS
T07952
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115105182
04121 Ubiquitin system [BR:
one04121
]
115105182
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115105182
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
115105182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
CTD
Motif
Other DBs
NCBI-GeneID:
115105182
NCBI-ProteinID:
XP_029482740
LinkDB
All DBs
Position
LG22:26926512..26955570
Genome browser
AA seq
1120 aa
AA seq
DB search
MAECSVTDSLDLNPDGSSSRQKQNQHQSRRGRARVDHNRTWSSPNNYVPLPQQQQDHFHH
GVKSSHDNVLVNFHPPPHHREDVQRGRGRGGNGSCGGGGRGSRGRNPRWNRPGVEIGTGP
LGLPGGHHGLVGGGYRPGTLHMERGPPIDGPSWRRDPGGRGGEVGPAHEDHQDTRPKKPR
RFSQEPRRGERSSKGPPHSLDKQENQENHATGGGGGGWDPVEPREETRSLEIGTRNRKGG
RTEDRNPHVDPRKKFQEPKRSQGPIKEYPQERKEPERGASGRDILPAHHDKLGPSTDKEP
NWRGQGKCTPLQDRGQRRTPKYDYRPGQKRGDNMPNKSKETQTGCLIEQLSEEKYECMVC
CEVIRVMAPVWSCLSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNTYK
CFCGKVTNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPAFVTKACICG
RTSQPMRCGQATAIHCDKQCDLILNCTEHPCTQACHSGLCQPCQLQVQQVCFCGVVYREV
LCGTDKDCFDGSGHFSCQKACGKMLDCEAHRCKQVCHRGLCQPCPRSPRLVRNCPCGQTA
LAKLLELGYPERRSCSDPIPSCGKTCNKPLPCGSNETIHICEKLCHEGCCGPCTLTSTIK
CRCGSKINDVPCATIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVGVEHTCSLVCGYKL
NCGLHRCQELCHRGNCQPCWQTSFDELACHCGGTVLFPPIACGTKPLECKNLCTRRHKCD
HQVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLTCNKVLLCDHRCRRI
CHRGECLAKGACRQPCVLPRADCGHPCNAPCHKGTSCPRNTCAAKVALQCDCGRRKETVV
CTEAASAHQRYAAIAMASKLSDMQLGDSVDIGLITKKEMKQAKLECDEGCAALERNRRLA
VALQSYPSVDPFNIRTSSSTYSDSLRGDARKDLKFVSEVEEEIKNLVELASKGKLSKRSH
CFPPMNREHRKIVHELAEVYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLIERDTG
VSRAPPPIAHIKQHSKTDGVSSWSKAVKEEPAIDYFDVQD
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgctcagtcacagactctctggatttgaatccagatgggtcttcatcacga
cagaaacaaaaccaacaccagtccaggaggggtcgagccagagtggaccacaaccgtacc
tggagtagtcctaataattatgtcccactgccgcagcagcagcaagaccattttcaccat
ggggtcaaatcatctcatgacaatgtcctagtaaacttccatcctcctccccaccataga
gaggatgtacagaggggtcgaggaagagggggtaatggaagttgtgggggaggtggccgg
ggctcaaggggccggaatccgaggtggaataggcctggggttgaaattggcactgggccc
cttggcttacctgggggccaccatggacttgttggtggaggctacaggcctggaacactc
cacatggagaggggaccccccattgacgggcctagctggcgtcgagaccctgggggccgg
gggggagaggtggggcctgcccacgaagaccaccaggacacccggcctaaaaagccccgg
cggttcagccaggagccacggagaggagagaggagctctaaaggacctcctcactctctg
gacaagcaggagaaccaggaaaaccatgctacaggaggagggggaggaggctgggatccg
gttgagcccagagaagaaacccgatcattagaaattggaaccagaaaccgtaaaggcggt
aggaccgaggacaggaatccccatgttgaccctcgaaagaaattccaagagccaaagcga
agccaggggccgatcaaagaatatccccaggagaggaaggagcctgaaaggggagccagc
ggcagagacatcctccctgcccatcatgacaaactgggccccagcactgacaaagagccc
aactggaggggtcaggggaaatgcacccccctgcaggacagaggccagaggagaacaccc
aaatatgactacagacctgggcagaagaggggggacaacatgcccaacaagagcaaggag
acacagaccggttgcctgattgagcagctgtccgaggagaagtatgagtgcatggtgtgc
tgtgaggtgatcagggtgatggcacctgtctggagctgtctcagctgcttccatgtcttc
catctcaactgcatcaagaagtgggcccgctccccagcctcacaggcagacgaaacaaat
gacgggtggaggtgtccagcttgtcagaatgttgtcttccaacccccaaacacctacaag
tgcttctgtggcaaagtgaccaacccggagttccagcgtagcgagatcccacacagctgt
ggagatatgtgtgggaagaagaggagcggagcagactgcaagcacccctgtaacatcttg
tgtcaccccggaccttgtccacagtgtcctgcctttgtcaccaaagcctgcatctgtgga
agaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaagcagtgt
gacttgatcctcaactgtaccgaacacccctgcacccaggcgtgccacagcggactgtgc
cagccgtgccaactacaggtccagcaggtgtgcttctgtggtgttgtctatcgggaggtg
ctgtgtgggacggataaagactgctttgacggctcaggacacttctcctgtcagaaagca
tgtggcaagatgttggactgtgaggcccaccgatgcaagcaggtgtgccaccgtgggctg
tgccagccgtgcccacgctcccccagactggtgaggaattgcccctgtgggcagacggcc
ttggccaagctcctggagctgggctaccctgagcgccgcagctgctctgaccccatccct
tcctgtggcaagacctgcaacaagcccctgccctgtggatccaacgagaccatccacatc
tgtgagaagctgtgccacgagggctgctgtggcccctgcacactcacctccaccatcaaa
tgcagatgtggttcgaagatcaatgatgttccctgtgcaaccatccagaatgaagatgga
ctgatttttacctgtgagaagcgctgcctaaagaagcgctcctgtggccgacacaaatgt
ggcgagctgtgctgtgtgggtgtggaacacacatgctctctggtctgtggctacaagctc
aactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccctgctgg
caaaccagttttgatgagctggcgtgccactgtggggggactgtcctgttccccccaatt
gcctgtggcaccaagcccttagagtgtaagaacctgtgtaccaggaggcacaagtgtgac
caccaagtgttccataattgccacagtgaggagaagtgcccaccctgtacttacctcact
cagaagtggtgcatgggaaagcatgagcgaaggagcaacattccgtgccacctgcaggac
atctcctgtggtctgacctgcaacaaggtgctgctgtgtgaccaccgctgccgccgcatc
tgccaccggggagaatgtctggccaagggcgcctgccgccagccctgtgtgctgccccgt
gccgactgtggccacccctgcaacgccccttgccacaagggcaccagttgcccgcgcaac
acctgcgctgccaaggtggcgctacagtgtgactgcggccggagaaaggaaacggtagtg
tgcacggaggcagccagtgcccatcagaggtatgcagccattgccatggccagtaagctg
tctgacatgcagctgggtgactctgtagacatcggtctcatcactaagaaggagatgaaa
caggccaagttggagtgtgacgaagggtgtgctgcactggaaaggaacaggcgattggct
gtggccctgcagagttacccttcagtggaccccttcaacatccgcacctcctcctccact
tatagtgacagcctccgaggagatgccagaaaagatttgaagtttgtcagcgaggttgaa
gaggagatcaagaatctggttgagttggccagcaagggtaaactgtccaagaggagccac
tgcttccccccaatgaacagagagcacaggaagatagtccacgagctggctgaggtctac
aatgtagagagcgtgagctacgacagcgagcccaaacgcaacgtggttatcaccgccatc
agggggaagtctgcctgtcctaactcaacactgacgtccctgatagagagagatacaggg
gtctcaagggctcccccacccattgcccatatcaaacaacatagcaagactgatggtgtg
agcagctggtccaaggcagtcaaagaagagccggcaatcgactactttgatgtccaggat
taa
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