Oncorhynchus nerka (sockeye salmon): 115105183
Help
Entry
115105183 CDS
T07952
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115105183 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115105183 (smarcd3)
03036 Chromosome and associated proteins [BR:
one03036
]
115105183 (smarcd3)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115105183 (smarcd3)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115105183 (smarcd3)
PBAF complex
115105183 (smarcd3)
GBAF(ncBAF) complex
115105183 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115105183
NCBI-ProteinID:
XP_029482741
LinkDB
All DBs
Position
LG22:26956499..27013578
Genome browser
AA seq
553 aa
AA seq
DB search
MATEDTAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYSGSPTVRPGL
PTPVMEPSRKRPAPSQQNQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVELLTSKAKRFSLPKDNILKGSRARLLVESWHRTPTTQETDGFQVKRPGDVSVR
CTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDK
YFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLK
SQMSSFLLSTANQQEIASLDNKVGQPHRKDSQSQLPKMTLKIHETIESINQLKIQRDFML
SFSRDPKGYIQDWLKSQSRDLKMMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQR
RQELEQALAVRNT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggacacggcggggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccatctggagctaggatgccccaccagggt
gcccccatgggcccccccggccccccgtacagtgggagccctacggtgcggcccggcctg
cccaccccggtcatggagcccagccgcaagagacctgccccctcccagcagaaccagcag
cagcagaacgtacagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattctcccacagaggatccgtgagctggtccct
gagtcacaggcttacatggacctgctggccttcgaacgtaaactggaccagaccatcatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcccgacgctgacgactcggatggc
agtattgcatcatgggagctgcgggttgaggggaagctactggatgatcctgggaagctg
aagaggaaattctcctctttcttcaagagcctggtgattgagctggacaaagacctatac
ggtcctgacaaccaccttgtagagctgctgaccagtaaagcgaagcgattcagccttcca
aaagacaacatactcaaagggtcgagagcaaggctgctcgttgaaagttggcaccgcact
cccaccacccaggagacggacggcttccaggtgaagcggccaggggacgtgagcgtgcgc
tgcacactgctgctaatgctggactaccagcccccccagtttaaactggaccctcgtctg
gctcggctgctgggtatccacacccagacccgctcctgtatcatccaggccctgtggcag
tatgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgtgacaag
tactttcagcagatctttgactgcccgaggctcaagttctcggagatcccccagcgtctc
accaacctcctcctgccccctgaccccatcgtcatcaaccacgtcatcagtgtggaccct
aatgaccagaagaagacggcatgctatgacattgacgtggaggtggaggaccccctgaag
agccagatgagcagcttcctgctctccaccgccaaccagcaggagatcgcctcattggac
aacaaggtgggacaaccacacaggaaggatagccaatcacaattacccaagatgacctta
aagatccatgagaccattgagtccatcaaccagttgaagatccagagggactttatgctc
agcttctccagggatcctaaaggctacatccaggactggctcaagtcccagagcagagac
ctgaagatgatgacagacgtggtggggaacccagaggaggagaggagggcggcgttttac
cacgagccctggtcccaggaggccgtcagtcgctacttctactgcaagatccagcagagg
agacaggagctggagcaggccttggccgtgaggaacacctaa
DBGET
integrated database retrieval system
