Oncorhynchus nerka (sockeye salmon): 115105185
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Entry
115105185 CDS
T07952
Name
(RefSeq) chondroitin sulfate glucuronyltransferase-like
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115105185
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115105185
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
115105185
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115105185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
APD1-4_M
Motif
Other DBs
NCBI-GeneID:
115105185
NCBI-ProteinID:
XP_029482750
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All DBs
Position
LG22:complement(27015471..27038991)
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AA seq
763 aa
AA seq
DB search
MRLSSFLAVFRPAFPLILGLSLGCSLSLLMVSWTQGDTFDSCGDELGNRGLFLGSNRGDP
HGDQRGGPGNEDFQPRIIPYHKDPNKPHKKVLRTRYIHTELGIRERLLVGVLTSRATLNT
LAVAVNRTVAHHFHRTFFFTGLRSSKVPHGMTVVAHGDDRPVWLMYETIRYLHQHYGLDY
DWFFLAQDDTYMQAERLAELVGHLSMGQDLYMGRSEEFIGGEERARYCHGGYGYLLSRSL
LARLQPHLDTCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQDMTYRSFELGKKADPERED
SAQFKNAFTVHPVSEPSLMYRLHKRFSQIELDWTYLQIQQLQVQINNLSELTPEGKVGAI
WPIGVNPPFMPKTRFEVINWEYFTEEHIYSCSDNAPKCELRGANWADVSAVLETAVKHLN
EHYQPQLRFKKRRLLNGYRRFDPTRGMEYMLDLALEAFTQKGHSQVIAKRVSLLRPLSTI
EIIPMPYVTEATRVQVILPVTAREQDFVGNFLDMYAMNTLDTHDNVLLTFLFVYDPFDAQ
RVSQSDVFAGIKAMIGEVEKRYGDVRIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLAS
VWTEVNADFLNRCRMNAISNWQVFFPTHFQEFSQTILYRDQQTLASFPAEALRDGRFDRH
VFEEACFYNTDYMASRTKMATDILDNDELLESMDVYEIFVRYSGLHVFRAVEPALVQKYV
RRACNPRFSEDIYHRCVLSNLEGLASRSHLAMALFEQEQANST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttcctccttcctggccgtgttcagacctgctttcccccttatcctggggctc
tctttgggatgcagcctgagcctgctgatggtctcctggacccagggagacacatttgac
tcgtgtggagatgaactgggcaataggggtctcttcctgggcagcaacaggggagacccc
catggggaccagagaggtggtcctgggaatgaggacttccagccacgcatcataccatac
cacaaggaccccaacaaaccacacaagaaggtcctcaggacgcgctacatccacacggag
ctgggcatccgagagcgcctcctggtgggcgtgctgacctcgcgggccaccctcaacacg
ctggcagtggcggtgaaccgcacagtggcccaccacttccaccgcaccttcttcttcacg
ggcctgcgcagctccaaggtcccccacggcatgacggtggtggcccacggcgacgaccgg
cccgtgtggctgatgtacgagacgatacgttacctgcaccagcactatggcttggactac
gactggtttttcctggcccaggacgacacctacatgcaggccgagaggctggccgagctg
gtgggccacctcagcatgggacaggacctctacatgggccggtcagaggagttcatcggt
ggggaagagagggccaggtactgccacgggggttatggctacttgctctcccgcagcctg
ctggcccgcctgcagccccacctggacacctgccgcaacgacatcctcagcgtcaggcct
gacgaatggcttgggcgctgcatcatcgactacctgggtctgagctgtgtggaggtacac
caggacatgacatatcgctcctttgagctggggaagaaagcagacccagagcgagaggac
agtgcccagtttaagaatgccttcacagtccaccctgtgtcagagcccagcctcatgtac
cgcctgcacaaacgcttcagccagatcgaactggactggacctacctacagatacagcag
ctgcaggtccagatcaacaacctgagtgagttgaccccagagggtaaggtgggggccatc
tggccaatcggggtcaatcctcccttcatgccaaagactcgtttcgaggtcatcaactgg
gagtacttcacagaggagcacatctactcatgctccgacaacgcccccaagtgtgaactg
cgtggcgccaactgggccgacgtgagcgccgtgctggagacggccgtgaagcacctcaac
gagcactaccagccccagctgcgcttcaagaaacgccgcctgctcaacggctaccggcgc
ttcgaccccacccggggcatggagtacatgctggacctggccctggaagccttcacacag
aaaggtcacagccaggtgatcgccaagcgggtcagcctgctccgccccctcagcaccatt
gagatcatccccatgccctatgtgacggaggccacccgggtgcaggtcatcctgcccgtc
acggcccgcgagcaggactttgtgggtaacttcctggacatgtatgcgatgaacacgctg
gacacgcacgacaatgtcctgctcaccttcctgtttgtctacgacccctttgacgcccag
cgcgtcagccagtcggacgtgttcgccggcatcaaggccatgatcggagaggtggagaag
cgctatggcgacgtgaggatcccctggatcagtgtgaagacggaggtgccctcgcaggtc
aagctgatggacataatctccaagaagcacccggtggacacgctcttcttcctggcctcg
gtgtggaccgaggtcaacgccgacttcctcaaccgctgccgcatgaacgccatcagcaac
tggcaggtgttcttccccacccacttccaggagttcagccagaccatcttgtaccgcgac
cagcagaccttggcctccttcccggccgaggccctgcgcgacggacgcttcgaccgccac
gtcttcgaggaggcatgcttctacaacaccgactacatggcgtcgcgcaccaagatggcc
actgacatcctggacaacgacgagctgctggagagcatggacgtgtacgagatctttgtg
cgctactcgggcttgcacgtgttccgggcggtggagccggcgctagtgcagaagtacgtg
cggcgggcgtgcaacccgcgcttcagcgaggacatctaccaccgctgtgtgctcagtaac
ctggagggcctggcctcgcggtcgcacctagccatggccctgtttgagcaggagcaggcc
aacagcacttag
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