Oncorhynchus nerka (sockeye salmon): 115105248
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Entry
115105248 CDS
T07952
Name
(RefSeq) glucocorticoid receptor-like isoform X1
KO
K05771
glucocorticoid receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115105248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115105248
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115105248
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115105248
Nuclear receptors [BR:
one03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
115105248
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Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115105248
NCBI-ProteinID:
XP_029482893
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Position
LG22:30913043..31008789
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AA seq
753 aa
AA seq
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MDNQDKSLERGEEGNFSVNAGSSKATTLTSVMHLPGSTPQPPARDSCNGLNVTKIQGELS
TAGTTSIGLPIEEAEVKLMGKVLRMQNAQKQQQNHHQQQQLFENFALLEESISDLNRANT
PGTSVLGCSNYLLPLKTEDFSPMDKDRLDMETVSFGQSLKDLDVNERLLGDNTLDILRDL
DLPGSLSDLNEFYLADEAAFLSSLSVDDALLVEGNMETKPIVSSSGGNCKNVNGVGQQLG
PGISMSVIKTEKDSDTSFIQLYTPGVIKQENERQSYCQISSLDIPGTHSSVGSMSGPSYH
YSTNTSTAVCVQQDQKPVFGLYPPLPSVSDGWNRGQKFGDGSGMSTPSFHVSFSSPTARP
EASSSTSSAPAKHSGPTHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGWRARQNTDG
QHNYLCAGRNDCIIDRIRRKNCPACRFRKCLQAGMNLEARKNKKLIRFKGQQATTETNAP
APDERACTLIPKSMPQLVPTMLSLLKAIEPEAIYSGYDSTIPDTSTRLMTTLNRLGGQQV
VSAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGGMLCFAPDLVIND
ERMKLPYMTDQCEQMLKISTEFVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQAVFDEIRM
TYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMQEMVGGLLQICFYTFVNKSLSVEFPE
MLAEIISNQIPKFKDGSVKPLLFHHALNHDTMP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggataaccaggacaagagcttagagagaggtgaagagggaaacttctcggttaacgca
ggcagttccaaggccaccacattaacttcagtgatgcatttgcctggctccacaccccag
cctccagccagagactcctgtaacggactgaatgtcactaagattcagggtgagctctcc
acagcagggacaacctccattggactccctatagaggaggctgaagtgaagttaatgggc
aaggtcctgagaatgcagaatgcacagaaacagcagcagaatcatcatcaacagcagcag
ctgtttgagaactttgctctgttggaggagagcatttcagatttgaatcgagccaacacc
ccagggacctccgtacttggatgttctaattaccttctccctctgaaaactgaggacttt
tcaccaatggataaggacaggcttgacatggagacggtcagctttggacagtcactgaag
gatttggatgtcaacgagaggctccttggtgacaatacgctggacattctgcgggatttg
gacttgcctggctctctgtctgacctgaatgagttttacctggctgacgaggccgctttc
ctttcctccctgtcagtggatgatgccctgcttgttgaaggcaacatggaaaccaagccc
atagtcagtagcagtgggggaaactgtaaaaatgtgaatggtgtggggcagcaactgggc
ccagggatctccatgtctgtcatcaagaccgagaaggactctgacacctccttcatccag
ctttacaccccgggggtaatcaagcaggagaacgagcgccagagctactgtcagatatcc
agcctggacatacctggtacccacagctcggtgggctccatgagtgggccgagttaccac
tacagcacaaacacatcgacggcagtgtgcgtacagcaggatcagaagcctgtctttggc
ctgtatccgccactgccctcagtcagtgatggctggaacagaggccagaaatttggggat
ggatcagggatgtcaactccatcttttcatgtcagcttcagcagtcccacggccagacca
gaggccagcagctccacatcttcagcccctgccaagcacagcggtccaacccataagatc
tgcctggtgtgttctgacgaggcttctggctgccactatggagtcctcacctgcggaagc
tgcaaggtcttcttcaagagggccgttgaaggatggagagcacgacaaaacacagatgga
caacacaactatctgtgtgccgggaggaatgactgcatcatagacaggatccgcaggaag
aactgtccggcgtgccgcttccgcaagtgtctccaagcagggatgaacctggaagcaagg
aaaaacaagaagctgatccgatttaaaggtcagcaggccacaacagagacaaacgctccc
gcacctgatgaaagggcctgcaccctgatcccaaagtccatgccccagctggtgcccacc
atgctgtccctgcttaaagccattgagccagaggccatttactctggctacgacagcacc
atccccgacacctccacccgccttatgaccaccctcaacaggttgggcggacagcaggtc
gtttcagctgttaagtgggccaagtccctaccagggttccggaaccttcacctggatgat
cagatgactctgctgcagtgctcctggctgttcctcatgtcattcggcctgggctggcgc
tcctaccagcagtgtaacgggggtatgctgtgcttcgcccctgacctggttattaatgat
gagaggatgaagctgccctatatgaccgaccagtgtgagcagatgctgaagatctccact
gagtttgtgaggttgcaggtgtcctacgacgagtacctgtgtatgaaagtcctgctgctg
ctcagcacagtaccaaaggatggactgaagagccaggctgtgtttgatgagatccgcatg
acctacatcaaggagctggggaaggccatcgtcaagcgggaagagaactccagccagaac
tggcagaggttctaccaactcactaagttactggactccatgcaggagatggtggggggc
ctcctgcagatctgcttctacacttttgtgaataaatcccttagtgtggagttccctgag
atgctggccgagatcatcagcaaccagataccaaaattcaaagatgggagtgtcaagccg
cttctgtttcatcatgccttaaaccatgacacaatgccttaa
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