Oncorhynchus nerka (sockeye salmon): 115105261
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Entry
115105261 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115105261
04082 Neuroactive ligand signaling
115105261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115105261
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115105261
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115105261
NCBI-ProteinID:
XP_029482919
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All DBs
Position
LG22:complement(32023212..32058996)
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AA seq
462 aa
AA seq
DB search
MGGRTGTVVLCVWACLMMANVLCGKSSGQNGQTDEQKDNTTVFTRILDRLLDGYDNRLRP
GLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMSVLRLNNLMAS
KIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHA
CPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVV
MTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS
ARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKE
SLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNS
VSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggacaggaacggtcgtactatgtgtgtgggcctgtttgatgatggccaat
gtgctttgtgggaaaagctctggacagaatggccagacggatgagcagaaagacaacact
acagtgttcacccggatcctagaccgtctcctggatggctatgacaatcgtctcagacca
gggttgggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattgggccc
gtctcggaccatgacatggaatacaccatcgacgtgttctttcgtcaaagctggaaggac
gagcggctaaaattcaaaggtccaatgtctgttctccgtttgaacaacctaatggccagt
aaaatctggacccctgacacattctttcacaatggcaagaagtctgtggcccacaacatg
actatgcccaacaaactcctacgaatcaccgaggagggaactctgctctacactatgaga
ctgacagtaagggcagagtgtcccatgcacctggaggacttccccatggatgcccatgct
tgtccattgaagtttggcagctatgcttacaccagagctgaggttgtgtacgtgtggacg
agaggggcagcccagtctgtcgtggtggctgaagatggctctcggctcaaccagtatgat
ctgatggggcaaagtgtggactctggggttgtccagtccagcacaggagagtatgttgtc
atgacgacacacttccatctgaagaggaagattggttattttgtcatccagacgtacctg
ccctgcatcatgacagtaatcctatcccaggtgtcgttctggctcaacagagagtccgtc
ccagccaggactgtgttcggagtgacaactgtgctgaccatgaccaccctcagtatcagc
gctaggaactctctcccaaaagtggcctacgccacagccatggactggttcattgcagtc
tgctatgcttttgtcttctctgccctcattgagtttgctacagtgaactatttcacaaag
aggggctatgcctgggacggaaaaagtgtggttccagagaagcaaaagaagaagaaggag
tccctcctgaagaagaacaacaccaccgcctacaccgccgccactgccacagccttcgct
ccaaacattgccagggaccctggtttggccaccattgccaaaagtgccccccctcccccc
accgagcccaaggaggagcccaagcccaagccaccagaggccaagaagaccttcaacagc
gtcagcaagatcgacaggatcgccagaatagccttcccgttactcttcggaacctttaac
ctggtctactgggcaacttacttgaataaaaagcccaagttacaggggatgaccccggga
tcccactaa
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