Oncorhynchus nerka (sockeye salmon): 115105263
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Entry
115105263 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115105263
04082 Neuroactive ligand signaling
115105263
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115105263
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115105263
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115105263
NCBI-ProteinID:
XP_029482925
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All DBs
Position
LG22:complement(32086431..32123293)
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AA seq
451 aa
AA seq
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MAFVFTFFFLSCVSNVWGNNPKSTEIDGNIYLDNITRILDRLLDGYDNRLRPGFGGPVTE
VKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTF
FRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSY
AYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQ
RKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV
SYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKVAAVKAAQEAAEAGRSDGE
SSSDASSMLKKRMNSTPHFERPAEVFPNPPVNAQAFLQQGSAVPSNNLLTGTSIIDKYSR
ILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgttttcactttcttttttctgtcctgtgtgagcaatgtttggggaaataat
ccgaaatcgaccgagattgatgggaatatctatttggataacattacgcgtatattggat
agattactggatggatatgacaacagactgcgacctggatttggaggtccagttaccgag
gtcaaaacagacatctttgtaaccagctttggtccagtgtcagatgttgagatggagtac
accatggacgtattcttccgtcaaacgtggattgacgagaggttgaaattcgagggcccc
atcgagattctgcgcctcaacaacctcatggtcagcaagatctggacgccagacacattc
ttccggaatggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgc
atcatgcagaacggaactatcctctacaccatgagattgactataaatgcggagtgtccc
atgcgactgatgaacttccccatggacggccatgcctgtcctctcaagtttggtagttat
gcctaccccatgagtgaaattgtgtacacgtggaaaaaaggaccactgttctctgtggaa
gtaccagaggagtcctccagcttgctacagtacgatctaataggacagacagtgtccagt
gagaggttaaaatccaacacaggtgaatatgtaatcatgactgttcacttccacctgcaa
aggaagatgggcttcttcttgattcagacctacattccctgtatcatgacggtgatcctg
gctcaggtctctttttggatcaataaggaatcggttcctgctcgaactgtatttggcatt
accactgtgctaaccatgaccacactcagcatcagcgcccgccactctctgcccaaagtt
tcctacgccacggccatggactggtttattgccgtatgtttcgccttcgttttctcagcc
ctcatcgagtttgcagcagtcaactacttctccacgctgcaggccaaccgggagctccgc
aaggtggccgccgtcaaggcagcccaggaggctgcagaggccgggaggagtgacggggag
tcctcttcggacgccagcagtatgctgaagaagaggatgaactctacgcctcactttgag
aggccagcggaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggc
tcagccgtgccgtccaacaacttactgacaggcaccagcatcatagacaagtactcacgc
atcctcttccctctgtcgttcggggccttcaacctagtctactggatcgtctatcttacc
aaggacaccatggagatgacaagagacagcgtgtga
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